RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 HELZP42694 1942 aaKnown RBP11.51□□□□□ -0.57
RPL28-202ENST00000426763 M0R1W7 72 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 IGHV3-11P01762 117 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 CRYBB3P26998 211 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
RPL28-202ENST00000426763 HGFACQ04756 655 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 IQCJQ1A5X6 159 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 CACNA1GO43497 2377 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 ZNF207O43670 478 aaKnown RBP11.51□□□□□ -0.57
RPL28-202ENST00000426763 G0S2P27469 103 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 GAFA1Q96PS6 74 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 MLNRO43193 412 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 PLAURQ03405 335 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 PRO3102Q9H379 93 aa11.51□□□□□ -0.57
RPL28-202ENST00000426763 IGKV1D-8A0A087WSZ0 117 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 FAM90A9PA6NNJ1 464 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 RRHO14718 337 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 RAMP3O60896 148 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 AMY1AP04745 511 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
RPL28-202ENST00000426763 CBLN2Q8IUK8 224 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 A0A1W2PRX2 142 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 AP4M1O00189 453 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 TNFSF13O75888 250 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 GOLT1AQ6ZVE7 132 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 NDUFS8O00217 210 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 LDLRAD4O15165 306 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 ANOS1P23352 680 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 COL8A2P25067 703 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 TMEM155Q4W5P6 130 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 Q6ZN92 141 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
RPL28-202ENST00000426763 F8VVB4 439 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 F8VWA3 439 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 J3QKU1 62 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 C2orf68Q2NKX9 166 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 OR10D4PQ8NGN7 298 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 F12P00748 615 aaPredicted RBP11.49□□□□□ -0.57
RPL28-202ENST00000426763 TFF3Q07654 80 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 SAPCD1Q5SSQ6 148 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 IGHV3-66A0A0C4DH42 116 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 EIF3GO75821 320 aaKnown RBP eCLIP11.49□□□□□ -0.571e-17■□□□□ 9.1
RPL28-202ENST00000426763 NBEAP1P0C6P0 100 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 TRAV20A0A0B4J274 112 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 OR9G9P0C7N8 305 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 TPTE2P1Q5T6R2 138 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 TUBA4BQ9H853 241 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 A6NNC1 897 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 PHOX2AO14813 284 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 MYOD1P15172 320 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
RPL28-202ENST00000426763 CD69Q07108 199 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 TMEM97Q5BJF2 176 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 BET1LQ9NYM9 111 aa11.49□□□□□ -0.57
RPL28-202ENST00000426763 MYO7BQ6PIF6 2116 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 PRCDQ00LT1 54 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 ICAM4Q14773 271 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 TMEM144Q7Z5S9 345 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.48□□□□□ -0.57
RPL28-202ENST00000426763 MPTX1A8MV57 137 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 NAPSAO96009 420 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 SAMD13Q5VXD3 122 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 HIST1H2BAQ96A08 127 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 RPRMQ9NS64 109 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 BPESC1Q9GZL8 116 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 RHOGP84095 191 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 KLRD1Q13241 179 aa11.48□□□□□ -0.57
RPL28-202ENST00000426763 FOXI3A8MTJ6 420 aaPredicted RBP11.47□□□□□ -0.57
RPL28-202ENST00000426763 SMUG1Q53HV7 270 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 Q6P435 159 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 MYOZ3Q8TDC0 251 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 RCC1LQ96I51 464 aaKnown RBP11.47□□□□□ -0.57
RPL28-202ENST00000426763 DMRTA2Q96SC8 542 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 IGKV1D-17A0A075B6S4 117 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 MT-ND6P03923 174 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 BTCP35070 178 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 HERVK_113P61574 105 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 PVRIGQ6DKI7 326 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 LINC01356Q8N9X3 169 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 RNF5Q99942 180 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 TRBV6-6A0A0A6YYG2 114 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 FAM3BP58499 235 aaPredicted RBP11.47□□□□□ -0.57
RPL28-202ENST00000426763 ZNF525Q8N782 197 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 ZNF318Q5VUA4 2279 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 IGHV1-3A0A0C4DH29 117 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 ELOBQ15370 118 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 FAM159AQ6UWV7 190 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 RARRES2Q99969 163 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
RPL28-202ENST00000426763 HLA-DRB1P01911 266 aa11.46□□□□□ -0.57
RPL28-202ENST00000426763 Q1RN00 199 aa11.46□□□□□ -0.57
RPL28-202ENST00000426763 CD99P14209 185 aa11.46□□□□□ -0.57
RPL28-202ENST00000426763 NPFFO15130 113 aa11.46□□□□□ -0.57
RPL28-202ENST00000426763 LY6HO94772 140 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms