RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CA7P43166 264 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 GNB1P62873 340 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 OR8B8Q15620 311 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 OR5P3Q8WZ94 311 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 TMEM186Q96B77 213 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 C10orf35Q96D05 121 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 TM2D1Q9BX74 207 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 CDC42EP3Q9UKI2 254 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 RNF115Q9Y4L5 304 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 MPC1Q9Y5U8 109 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 PPIAL4DF5H284 164 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 TOMM40O96008 361 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 CAMPP49913 170 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 RSPO1Q2MKA7 263 aaPredicted RBP13.32□□□□□ -0.28
PKP4-205ENST00000426248 NRN1LQ496H8 165 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 ZNF324BQ6AW86 544 aaPredicted RBP13.32□□□□□ -0.28
PKP4-205ENST00000426248 OR2T6Q8NHC8 308 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 CORTO00230 105 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 RBFOX2O43251 390 aaKnown RBP eCLIP13.32□□□□□ -0.281e-8■□□□□ 10.8
PKP4-205ENST00000426248 NPBWR2P48146 333 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 PAX9P55771 341 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 PRAMEF6Q5VXH4 476 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 HAPLN4Q86UW8 402 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
PKP4-205ENST00000426248 SCO2A0A1W2PP80 73 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 SYNGR1O43759 233 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 FRMD6-AS1P0C7T7 363 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 F2RP25116 425 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 TFF3Q07654 80 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 GCSAMLQ5JQS6 135 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 ZNF826PQ6ZT77 177 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 RCHY1Q96PM5 261 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 DECR2Q9NUI1 292 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 ZNF816Q0VGE8 651 aaPredicted RBP13.31□□□□□ -0.28
PKP4-205ENST00000426248 OCC1Q8TAD7 63 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 PLEKHA3Q9HB20 300 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 AKAP13Q12802 2813 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 PGLYRP1O75594 196 aaPredicted RBP13.31□□□□□ -0.28
PKP4-205ENST00000426248 CA2P00918 260 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 PSG9Q00887 426 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 MZT1Q08AG7 82 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 SVIPQ8NHG7 77 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 CLEC7AQ9BXN2 247 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 TMEM56-RWDD3S4R434 201 aa13.31□□□□□ -0.28
PKP4-205ENST00000426248 EPG5Q9HCE0 2579 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 A0A1B0GV72 72 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 ACTL6BO94805 426 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 FOXL1Q12952 345 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 MRPS16Q9Y3D3 137 aaKnown RBP13.3□□□□□ -0.28
PKP4-205ENST00000426248 TRAV9-2A0A087WT02 112 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 SLC25A34Q6PIV7 304 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 OR5A2Q8NGI9 324 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 OR8B2Q96RD0 313 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 REPIN1Q9BWE0 567 aaKnown RBP13.3□□□□□ -0.28
PKP4-205ENST00000426248 FOXL2NBQ6ZUU3 175 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 STPG3Q8N7X2 389 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 PLSCR4Q9NRQ2 329 aa13.3□□□□□ -0.28
PKP4-205ENST00000426248 IGHV3-43A0A0B4J1X8 118 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 KIR2DS1A0A191URI9 304 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 IGHV3-43DP0DP04 118 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 KIR2DS4P43632 304 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 KIR2DS1Q14954 304 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 CEACAM21Q3KPI0 293 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 NMSQ5H8A3 153 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 C12orf54Q6X4T0 127 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 OR5B3Q8NH48 314 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 LINC01560Q8TB33 94 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 ABHD14BQ96IU4 210 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 TMEM147Q9BVK8 224 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 A0A1W2PS18 150 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 SCGB2A2Q13296 93 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 CLEC5AQ9NY25 188 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 PEF1Q9UBV8 284 aaKnown RBP13.29□□□□□ -0.28
PKP4-205ENST00000426248 APCSP02743 223 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 ZNF474Q6S9Z5 364 aaPredicted RBP13.29□□□□□ -0.28
PKP4-205ENST00000426248 IL36BQ9NZH7 164 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 FAM215AQ9Y5M1 114 aa13.29□□□□□ -0.28
PKP4-205ENST00000426248 IGLL1P15814 213 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 UCP1P25874 307 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 PSG7Q13046 419 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 TP53TG3Q9ULZ0 132 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 MBD3L4A6NDZ8 208 aaPredicted RBP13.28□□□□□ -0.28
PKP4-205ENST00000426248 MBD3L3A6NE82 208 aaPredicted RBP13.28□□□□□ -0.28
PKP4-205ENST00000426248 MBD3L5A6NJ08 208 aaPredicted RBP13.28□□□□□ -0.28
PKP4-205ENST00000426248 MPV17P39210 176 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 UBE2G1P62253 170 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 WDR73Q6P4I2 378 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 MBD3L2Q8NHZ7 208 aaPredicted RBP13.28□□□□□ -0.28
PKP4-205ENST00000426248 PMCHL2Q9BQD1 86 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 A0A0G2JNJ9 132 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 ENSAO43768 121 aaKnown RBP13.28□□□□□ -0.28
PKP4-205ENST00000426248 TIGITQ495A1 244 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 Q6ZRM9 215 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 Q9UFV3 132 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 IGLC7A0M8Q6 106 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 OR4C46A6NHA9 309 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 CCL8P80075 99 aa13.28□□□□□ -0.28
PKP4-205ENST00000426248 SSX8Q7RTT4 187 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms