RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 OR10X1Q8NGY0 326 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 TECRQ9NZ01 308 aaKnown RBP11.03□□□□□ -0.64
USP42-203ENST00000426246 TRBV20OR9-2A0A075B6H5 130 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 IGHV1-18A0A0C4DH31 117 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 ZNF253O75346 499 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 SERF1AO75920 110 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 RPP30P78346 268 aaKnown RBP11.03□□□□□ -0.64
USP42-203ENST00000426246 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 LINC00596Q86U02 117 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 P2RX4Q99571 388 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 MRPL18Q9H0U6 180 aaKnown RBP11.03□□□□□ -0.64
USP42-203ENST00000426246 OR51B2Q9Y5P1 312 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 HELTA6NFD8 242 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.03□□□□□ -0.64
USP42-203ENST00000426246 PROP1O75360 226 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 PYYP10082 97 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 TIGITQ495A1 244 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 SLC35E4Q6ICL7 350 aa11.03□□□□□ -0.64
USP42-203ENST00000426246 FAM208BQ5VWN6 2430 aa11.02□□□□□ -0.64
USP42-203ENST00000426246 RAB29O14966 203 aa11.02□□□□□ -0.64
USP42-203ENST00000426246 C11orf53Q8IXP5 236 aa11.02□□□□□ -0.64
USP42-203ENST00000426246 ZADH2Q8N4Q0 377 aa11.02□□□□□ -0.64
USP42-203ENST00000426246 GCSAMQ8N6F7 178 aa11.02□□□□□ -0.64
USP42-203ENST00000426246 SSBP4Q9BWG4 385 aaPredicted RBP11.02□□□□□ -0.64
USP42-203ENST00000426246 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 GFRA3O60609 400 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 HPRT1P00492 218 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 MOSP00540 346 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 PLGLAQ15195 96 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 SIGLECL1Q8N7X8 197 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 TXN2Q99757 166 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 GSX1Q9H4S2 264 aaPredicted RBP11.02□□□□□ -0.65
USP42-203ENST00000426246 DSCAMO60469 2012 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 LYNX1G3V0Z9 82 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 CSN3P07498 182 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 LYNX1P0DP58 116 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 UBE2L3P68036 154 aaKnown RBP11.02□□□□□ -0.65
USP42-203ENST00000426246 ATP6V1FQ16864 119 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 IQCJQ1A5X6 159 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 CENPWQ5EE01 88 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
USP42-203ENST00000426246 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 HARBI1Q96MB7 349 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 GGTLC1Q9BX51 225 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 NPVFQ9HCQ7 196 aa11.02□□□□□ -0.65
USP42-203ENST00000426246 MBNL3Q9NUK0 354 aaKnown RBP11.02□□□□□ -0.65
USP42-203ENST00000426246 GCHFRP30047 84 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 ERVK11-1P61568 191 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 RHOBP62745 196 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 REC114Q7Z4M0 266 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 A0A1B0GW64 132 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 TMEM250H0YL14 139 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 MT-CO2P00403 227 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 TMEM11P17152 192 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 CDKN1AP38936 164 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 SPACA3Q8IXA5 215 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 Q8TCH9 128 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 MCRIP2Q9BUT9 160 aaKnown RBP11.01□□□□□ -0.65
USP42-203ENST00000426246 PIGBOS1A0A0B4J2F0 54 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 COX7A1P24310 79 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
USP42-203ENST00000426246 EFNB3Q15768 340 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 ACSF3Q4G176 576 aaPredicted RBP11.01□□□□□ -0.65
USP42-203ENST00000426246 KRTCAP3Q53RY4 240 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 CT45A1Q5HYN5 189 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 WDR31Q8NA23 367 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 OR4S2Q8NH73 311 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 CT45A3Q8NHU0 189 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 ST6GALNAC6Q969X2 333 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 ZNF355PQ9NSJ1 428 aa11.01□□□□□ -0.65
USP42-203ENST00000426246 IGHV3OR16-8A0A075B7F1 116 aa11□□□□□ -0.65
USP42-203ENST00000426246 MUC21A0A0G2JKD1 596 aa11□□□□□ -0.65
USP42-203ENST00000426246 MUC21A0A140T8X8 626 aa11□□□□□ -0.65
USP42-203ENST00000426246 GNG5P63218 68 aa11□□□□□ -0.65
USP42-203ENST00000426246 JOSD1Q15040 202 aaPredicted RBP11□□□□□ -0.65
USP42-203ENST00000426246 MUC21Q5SSG8 566 aa11□□□□□ -0.65
USP42-203ENST00000426246 Q6ZS49 121 aa11□□□□□ -0.65
USP42-203ENST00000426246 MMD2Q8IY49 270 aa11□□□□□ -0.65
USP42-203ENST00000426246 NABP2Q9BQ15 211 aa11□□□□□ -0.65
USP42-203ENST00000426246 NAGKQ9UJ70 344 aa11□□□□□ -0.65
USP42-203ENST00000426246 ZNF835Q9Y2P0 537 aa11□□□□□ -0.65
USP42-203ENST00000426246 TRAV1-1A0A0B4J248 108 aa11□□□□□ -0.65
USP42-203ENST00000426246 GATCO43716 136 aaKnown RBP11□□□□□ -0.65
USP42-203ENST00000426246 DIAPH2-AS1Q14236 149 aa11□□□□□ -0.65
USP42-203ENST00000426246 ARSJQ5FYB0 599 aaPredicted RBP11□□□□□ -0.65
USP42-203ENST00000426246 CISD2Q8N5K1 135 aaKnown RBP11□□□□□ -0.65
USP42-203ENST00000426246 ZNF439Q8NDP4 499 aa11□□□□□ -0.65
USP42-203ENST00000426246 Q8NFD4 153 aa11□□□□□ -0.65
USP42-203ENST00000426246 OR2D3Q8NGH3 330 aa11□□□□□ -0.65
USP42-203ENST00000426246 ANAPC16Q96DE5 110 aa11□□□□□ -0.65
USP42-203ENST00000426246 DYNLRB1Q9NP97 96 aa11□□□□□ -0.65
USP42-203ENST00000426246 PTPN13Q12923 2485 aa11□□□□□ -0.65
USP42-203ENST00000426246 TLN2Q9Y4G6 2542 aa11□□□□□ -0.65
USP42-203ENST00000426246 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
USP42-203ENST00000426246 MGST3O14880 152 aa10.99□□□□□ -0.65
USP42-203ENST00000426246 CXorf1O96002 111 aa10.99□□□□□ -0.65
USP42-203ENST00000426246 OR1B1Q8NGR6 318 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms