RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 Q8N402 240 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 LSM10Q969L4 123 aaKnown RBP9.83□□□□□ -0.84
VRK3-203ENST00000424804 EEF1AKMT3Q96AZ1 226 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 SEC22AQ96IW7 307 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 PRRT1Q99946 306 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 ZC4H2Q9NQZ6 224 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 FKBP11Q9NYL4 201 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 SCP2D1Q9UJQ7 156 aa9.83□□□□□ -0.84
VRK3-203ENST00000424804 IGHV3-21A0A0B4J1V1 117 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 DBX1A6NMT0 343 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 ZNF701M0R085 212 aaPredicted RBP9.82□□□□□ -0.84
VRK3-203ENST00000424804 CYB5BO43169 146 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 CRYGCP07315 174 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 OR5AC1P0C628 307 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 INPP1P49441 399 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 SPANXN2Q5MJ10 180 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 TOMM5Q8N4H5 51 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 TMEM56Q96MV1 263 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 SOSTQ9BQB4 213 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 FAM212BQ9NTI7 297 aaPredicted RBP9.82□□□□□ -0.84
VRK3-203ENST00000424804 V9GYH0 126 aa9.82□□□□□ -0.84
VRK3-203ENST00000424804 IGLV11-55A0A075B6I3 123 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.81□□□□□ -0.84
VRK3-203ENST00000424804 MFSD2BA6NFX1 497 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 BMPR1BO00238 502 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 ATG12O94817 140 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 FAUP35544 74 aaKnown RBP9.81□□□□□ -0.84
VRK3-203ENST00000424804 ARL3P36405 182 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 WT1-ASQ06250 92 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 ZNF57Q68EA5 555 aaPredicted RBP9.81□□□□□ -0.84
VRK3-203ENST00000424804 THOC7Q6I9Y2 204 aaKnown RBP9.81□□□□□ -0.84
VRK3-203ENST00000424804 GDPD1Q8N9F7 314 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 RRNAD1Q96FB5 475 aaKnown RBP9.81□□□□□ -0.84
VRK3-203ENST00000424804 RTBDNQ9BSG5 229 aaPredicted RBP9.81□□□□□ -0.84
VRK3-203ENST00000424804 PDCD10Q9BUL8 212 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 C5orf66Q9H5L9 145 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 NAA60Q9H7X0 242 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 NDUFA4L2Q9NRX3 87 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 THYN1Q9P016 225 aa9.81□□□□□ -0.84
VRK3-203ENST00000424804 ZNF785A8K8V0 405 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 OR2C1O95371 312 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 IGKV1-5P01602 117 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 AKR1C4P17516 323 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.84
VRK3-203ENST00000424804 GPR183P32249 361 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 AP3S2P59780 193 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 ZNF79Q15937 498 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 HSD17B13Q7Z5P4 300 aaPredicted RBP9.8□□□□□ -0.84
VRK3-203ENST00000424804 CCDC190Q86UF4 302 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 SGPP2Q8IWX5 399 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 UBAC2Q8NBM4 344 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 OR5B3Q8NH48 314 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 SRSF8Q9BRL6 282 aaKnown RBP9.8□□□□□ -0.84
VRK3-203ENST00000424804 TMEM14BQ9NUH8 114 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 PRR13Q9NZ81 148 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 GPR132Q9UNW8 380 aa9.8□□□□□ -0.84
VRK3-203ENST00000424804 LINC00854A0A1B0GVQ3 168 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 ZNF320A2RRD8 509 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 GGCTO75223 188 aaKnown RBP9.79□□□□□ -0.84
VRK3-203ENST00000424804 IFNA17P01571 189 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 EDN2P20800 178 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 SURF2Q15527 256 aaPredicted RBP9.79□□□□□ -0.84
VRK3-203ENST00000424804 TMEM268Q5VZI3 342 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 TRIQKQ629K1 86 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 TMED4Q7Z7H5 227 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 SLC35G3Q8N808 338 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 TRIM63Q969Q1 353 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 MISP3Q96FF7 219 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 CXorf58Q96LI9 332 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 CCDC140Q96MF4 163 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 SCGB3A2Q96PL1 93 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 PLEKHA3Q9HB20 300 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
VRK3-203ENST00000424804 F11RQ9Y624 299 aaKnown RBP9.79□□□□□ -0.84
VRK3-203ENST00000424804 TRBV7-1A0A0A6YYK4 115 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 IGHV3-35A0A0C4DH35 117 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 CRYM-AS1A6NIL9 109 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 CLEC3BP05452 202 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 FGF2P09038 288 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 UCP1P25874 307 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 HOXA1P49639 335 aaPredicted RBP9.78□□□□□ -0.84
VRK3-203ENST00000424804 HSPE1P61604 102 aaKnown RBP9.78□□□□□ -0.84
VRK3-203ENST00000424804 PRCDQ00LT1 54 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 DHODHQ02127 395 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 KLF9Q13886 244 aaPredicted RBP9.78□□□□□ -0.84
VRK3-203ENST00000424804 FAM209BQ5JX69 171 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 DYNLRB2Q8TF09 96 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
VRK3-203ENST00000424804 SPATA25Q9BR10 227 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 TMEM222Q9H0R3 208 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 RETNQ9HD89 108 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 SLC2A8Q9NY64 477 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 NDUFA13Q9P0J0 144 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 KCNIP3Q9Y2W7 256 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 SELENOKQ9Y6D0 94 aa9.78□□□□□ -0.84
VRK3-203ENST00000424804 A0A0G2JRQ6 117 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 RBMY1BA6NDE4 496 aaKnown RBP9.77□□□□□ -0.85
VRK3-203ENST00000424804 RBMY1EA6NEQ0 496 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms