RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 DBX1A6NMT0 343 aa16.63■□□□□ 0.25
TRAF4-204ENST00000422344 ZC4H2Q9NQZ6 224 aa16.63■□□□□ 0.25
TRAF4-204ENST00000422344 C2orf70A6NJV1 201 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 C3orf84H3BNL1 204 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 B3GALNT1O75752 331 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 FRMD6-AS1P0C7T7 363 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 TNFSF8P32971 234 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 PLET1Q6UQ28 207 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 OR4C16Q8NGL9 310 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 RNASE11Q8TAA1 199 aaKnown RBP16.62■□□□□ 0.25
TRAF4-204ENST00000422344 PRRT1Q99946 306 aa16.62■□□□□ 0.25
TRAF4-204ENST00000422344 GSTZ1O43708 216 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-204ENST00000422344 FOLR2P14207 255 aa16.61■□□□□ 0.25
TRAF4-204ENST00000422344 PRCDQ00LT1 54 aa16.61■□□□□ 0.25
TRAF4-204ENST00000422344 SURF2Q15527 256 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-204ENST00000422344 SP6Q3SY56 376 aa16.61■□□□□ 0.25
TRAF4-204ENST00000422344 NXF2Q9GZY0 626 aaKnown RBP16.61■□□□□ 0.25
TRAF4-204ENST00000422344 PLEKHA3Q9HB20 300 aa16.61■□□□□ 0.25
TRAF4-204ENST00000422344 TEX13DA0A0J9YY54 714 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-204ENST00000422344 MFAP2P55001 183 aa16.6■□□□□ 0.25
TRAF4-204ENST00000422344 HSPE1P61604 102 aaKnown RBP16.6■□□□□ 0.25
TRAF4-204ENST00000422344 CD300EQ496F6 205 aaPredicted RBP16.6■□□□□ 0.25
TRAF4-204ENST00000422344 OR1P1Q8NH06 330 aa16.6■□□□□ 0.25
TRAF4-204ENST00000422344 RRNAD1Q96FB5 475 aaKnown RBP16.6■□□□□ 0.25
TRAF4-204ENST00000422344 PDCD10Q9BUL8 212 aa16.6■□□□□ 0.25
TRAF4-204ENST00000422344 PALMDQ9NP74 551 aa16.6■□□□□ 0.25
TRAF4-204ENST00000422344 C21orf62Q9NYP8 219 aa16.6■□□□□ 0.25
TRAF4-204ENST00000422344 TECRQ9NZ01 308 aaKnown RBP16.6■□□□□ 0.25
TRAF4-204ENST00000422344 DYNC2H1Q8NCM8 4307 aaKnown RBP16.59■□□□□ 0.25
TRAF4-204ENST00000422344 DNAH7Q8WXX0 4024 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 IGHV3-21A0A0B4J1V1 117 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 ANKRD20A5PA0PJZ0 165 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 IZUMO1RA6ND01 250 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 TGOLN2O43493 480 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 IGKV1-5P01602 117 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 IGHV4-30-4P0DP06 118 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 ERHP84090 104 aaKnown RBP16.59■□□□□ 0.25
TRAF4-204ENST00000422344 IZUMO4Q1ZYL8 232 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 ADAMTSL5Q6ZMM2 481 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 Q8N1Y9 231 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 OR2C3Q8N628 320 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 UBAC2Q8NBM4 344 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 SCP2D1Q9UJQ7 156 aa16.59■□□□□ 0.25
TRAF4-204ENST00000422344 TENM2Q9NT68 2774 aa16.58■□□□□ 0.25
TRAF4-204ENST00000422344 OR2T8A6NH00 312 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 A8MWP6 167 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 CBLN1P23435 193 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 UCP1P25874 307 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 S100A5P33763 92 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 DEFB114Q30KQ6 69 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 Q56UQ5 140 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 SBSPONQ8IVN8 264 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 SLC35G3Q8N808 338 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 OR51S1Q8NGJ8 323 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 SCARB1Q8WTV0 552 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 MISP3Q96FF7 219 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 BSCL2Q96G97 398 aaPredicted RBP16.58■□□□□ 0.24
TRAF4-204ENST00000422344 NAA60Q9H7X0 242 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 MCUBQ9NWR8 336 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 UFC1Q9Y3C8 167 aa16.58■□□□□ 0.24
TRAF4-204ENST00000422344 IGHV3-35A0A0C4DH35 117 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 IFNA17P01571 189 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 OR5AC1P0C628 307 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 EDN2P20800 178 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 GUCA2BQ16661 112 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 SPSB3Q6PJ21 355 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 CACNG8Q8WXS5 425 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 ATP6V0BQ99437 205 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 RTBDNQ9BSG5 229 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-204ENST00000422344 THAP7Q9BT49 309 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-204ENST00000422344 TMEM222Q9H0R3 208 aa16.57■□□□□ 0.24
TRAF4-204ENST00000422344 RYR2Q92736 4967 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 HUWE1Q7Z6Z7 4374 aaKnown RBP16.56■□□□□ 0.24
TRAF4-204ENST00000422344 TMEM213A2RRL7 107 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 DHODHQ02127 395 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 PYDC2Q56P42 97 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 SPINK9Q5DT21 86 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 MARC2Q969Z3 335 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 SCGB3A2Q96PL1 93 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 SOSTQ9BQB4 213 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 C5orf66Q9H5L9 145 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 TUBA4BQ9H853 241 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 GAR1Q9NY12 217 aaKnown RBP16.56■□□□□ 0.24
TRAF4-204ENST00000422344 SLC2A8Q9NY64 477 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 GPR132Q9UNW8 380 aa16.56■□□□□ 0.24
TRAF4-204ENST00000422344 A0A0B4J293 547 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 K7EIM0 57 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 P0C879 139 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 FAUP35544 74 aaKnown RBP16.55■□□□□ 0.24
TRAF4-204ENST00000422344 SNCAP37840 140 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 CD81P60033 236 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 TM4SF20Q53R12 229 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 ZNF57Q68EA5 555 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-204ENST00000422344 UNQ9165/PRO28630Q6UXU0 137 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 UXS1Q8NBZ7 420 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 ZNF114Q8NC26 417 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 ZMAT4Q9H898 229 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 ENY2Q9NPA8 101 aa16.55■□□□□ 0.24
TRAF4-204ENST00000422344 A8MZ25 164 aa16.54■□□□□ 0.24
TRAF4-204ENST00000422344 ST8SIA3O43173 380 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms