RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 WNT2P09544 360 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 CBLN1P23435 193 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 RPP30P78346 268 aaKnown RBP10.91□□□□□ -0.66
MCF2L-213ENST00000421756 EFNB3Q15768 340 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 UNQ6494/PRO21346Q6UXR6 183 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 TRAV34A0A0B4J273 112 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 ORM2P19652 201 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 A0A087WWC5 75 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 MOSP00540 346 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 VDAC2P45880 294 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-213ENST00000421756 ZNF90Q03938 601 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 RTL8BQ17RB0 113 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 FAM57AQ8TBR7 257 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 MALSU1Q96EH3 234 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 MISP3Q96FF7 219 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 ASCL2Q99929 193 aa10.91□□□□□ -0.66
MCF2L-213ENST00000421756 NOTCH3Q9UM47 2321 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 hADV38S2A0JD32 116 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 C15orf61A6NNL5 157 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-213ENST00000421756 RAB31Q13636 194 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 MORN5Q5VZ52 161 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 TMEM200BQ69YZ2 307 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 RNASE7Q9H1E1 156 aaKnown RBP10.9□□□□□ -0.66
MCF2L-213ENST00000421756 TRAPPC1Q9Y5R8 145 aa10.9□□□□□ -0.66
MCF2L-213ENST00000421756 PPIAL4EA0A075B759 164 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 IGKV1OR2-108A0A075B7D4 117 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 C17orf100A8MU93 164 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 PPIAL4DF5H284 164 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 HRASP01112 189 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 PPIAL4FP0DN26 164 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 PYYP10082 97 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 CNTFRP26992 372 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 TIMP3P35625 211 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 ASCL5Q7RTU5 278 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 LINC01551Q86U37 167 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 TMEM256Q8N2U0 113 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 P2RX4Q99571 388 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 PPIAL4AQ9Y536 164 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 TLN2Q9Y4G6 2542 aa10.9□□□□□ -0.67
MCF2L-213ENST00000421756 NKX6-3A6NJ46 265 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 RAB7AP51149 207 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 Q8N7P7 452 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 HIST1H2BLQ99880 126 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 NABP2Q9BQ15 211 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 TCEAL7Q9BRU2 100 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 FAM103A1Q9BTL3 118 aaKnown RBP10.89□□□□□ -0.67
MCF2L-213ENST00000421756 IL19Q9UHD0 177 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 NDUFB3O43676 98 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 NDUFS6O75380 124 aaKnown RBP10.89□□□□□ -0.67
MCF2L-213ENST00000421756 TNFRSF1AP19438 455 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 IL3RAP26951 378 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 GCHFRP30047 84 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 USF2Q15853 346 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-213ENST00000421756 NPIPB3Q92617 1050 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 ZNF714Q96N38 554 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 SEBOXQ9HB31 216 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-213ENST00000421756 MANBALQ9NQG1 85 aa10.89□□□□□ -0.67
MCF2L-213ENST00000421756 TIMM8BQ9Y5J9 83 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-213ENST00000421756 TEX50A0A1B0GTY4 177 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 B4DEV8 164 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 SCGB1D1O95968 90 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 PFN1P07737 140 aaKnown RBP10.88□□□□□ -0.67
MCF2L-213ENST00000421756 SP5Q6BEB4 398 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-213ENST00000421756 PQLC2Q6ZP29 291 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 LHBP01229 141 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 IER3P46695 156 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 MRPL54Q6P161 138 aaKnown RBP10.88□□□□□ -0.67
MCF2L-213ENST00000421756 TRAT1Q6PIZ9 186 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 ZNF788Q6ZQV5 615 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 C1orf159Q96HA4 380 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 F2RL2O00254 374 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 APOA2P02652 100 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 THBDP07204 575 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 PLGLAQ15195 96 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 FLYWCH2Q96CP2 140 aaKnown RBP10.88□□□□□ -0.67
MCF2L-213ENST00000421756 SFXN3Q9BWM7 321 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 OR51M1Q9H341 326 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 TIMM9Q9Y5J7 89 aa10.88□□□□□ -0.67
MCF2L-213ENST00000421756 SETD2Q9BYW2 2564 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-213ENST00000421756 FCN3O75636 299 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
MCF2L-213ENST00000421756 CRYBG3Q68DQ2 2970 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 RAI1Q7Z5J4 1906 aaPredicted RBP10.87□□□□□ -0.67
MCF2L-213ENST00000421756 IGLV3-9A0A075B6K5 115 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 RHOBP62745 196 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 RANP62826 216 aaKnown RBP10.87□□□□□ -0.67
MCF2L-213ENST00000421756 TNXAQ16473 311 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 OR8I2Q8N0Y5 310 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 TMEM106BQ9NUM4 274 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 CTSZQ9UBR2 303 aa10.87□□□□□ -0.67
MCF2L-213ENST00000421756 NUPR1O60356 82 aa10.86□□□□□ -0.67
MCF2L-213ENST00000421756 CXorf1O96002 111 aa10.86□□□□□ -0.67
MCF2L-213ENST00000421756 KCNIP4Q6PIL6 250 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms