RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TRBV24-1A0A075B6N3 115 aa10.4□□□□□ -0.74
CLCN4-203ENST00000421085 CIARTQ8N365 385 aaPredicted RBP10.4□□□□□ -0.74
CLCN4-203ENST00000421085 GFI1Q99684 422 aa10.4□□□□□ -0.74
CLCN4-203ENST00000421085 TUBGCP6Q96RT7 1819 aa10.4□□□□□ -0.74
CLCN4-203ENST00000421085 CEACAM4O75871 244 aa10.4□□□□□ -0.74
CLCN4-203ENST00000421085 ZNF585BQ52M93 769 aa10.4□□□□□ -0.74
CLCN4-203ENST00000421085 OSTCQ9NRP0 149 aa10.4□□□□□ -0.74
CLCN4-203ENST00000421085 DEPPQ9NTK1 212 aa10.4□□□□□ -0.74
CLCN4-203ENST00000421085 IGHV3-49A0A0A0MS15 119 aa10.4□□□□□ -0.75
CLCN4-203ENST00000421085 CCL21O00585 134 aa10.4□□□□□ -0.75
CLCN4-203ENST00000421085 C1orf194Q5T5A4 169 aa10.4□□□□□ -0.75
CLCN4-203ENST00000421085 PNKDQ8N490 385 aa10.4□□□□□ -0.75
CLCN4-203ENST00000421085 OSR1Q8TAX0 266 aaPredicted RBP10.4□□□□□ -0.75
CLCN4-203ENST00000421085 RAX2Q96IS3 184 aa10.4□□□□□ -0.75
CLCN4-203ENST00000421085 HOXA3O43365 443 aaPredicted RBP10.39□□□□□ -0.75
CLCN4-203ENST00000421085 CDCP2Q5VXM1 449 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 J3QRE1 110 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 PYY3Q5JQD4 70 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 COQ2Q96H96 371 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 CYTL1Q9NRR1 136 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 IFNL4K9M1U5 179 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 STARD6P59095 220 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 SCN8AQ9UQD0 1980 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 CACNG7P62955 275 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 TEX38Q6PEX7 206 aa10.39□□□□□ -0.75
CLCN4-203ENST00000421085 SLC25A45Q8N413 288 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 HBDP02042 147 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 PCOLCEQ15113 449 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 NUDT10Q8NFP7 164 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 VKORC1Q9BQB6 163 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 DCTN5Q9BTE1 182 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 WBP1LQ9NX94 342 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 NEUROG3Q9Y4Z2 214 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 FAM181BA6NEQ2 426 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 PRR32B1ATL7 298 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 SEC11AP67812 179 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 TNFRSF18Q9Y5U5 241 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 TRBV6-7A0A0A0MS04 114 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 TRAV12-3A0A0B4J271 114 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 DPM2O94777 84 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 MPZP25189 248 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 CTSSP25774 331 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 CACNG8Q8WXS5 425 aa10.38□□□□□ -0.75
CLCN4-203ENST00000421085 SPAG8Q99932 426 aaPredicted RBP10.38□□□□□ -0.75
CLCN4-203ENST00000421085 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.38□□□□□ -0.75
CLCN4-203ENST00000421085 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
CLCN4-203ENST00000421085 TMEM171Q8WVE6 324 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 DUX5Q96PT3 197 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 NAA38Q9BRA0 125 aaKnown RBP10.37□□□□□ -0.75
CLCN4-203ENST00000421085 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 FBXL15Q9H469 300 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 ST20Q9HBF5 79 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 A0A0A6YYD4 124 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 RNASEH2CQ8TDP1 164 aaKnown RBP10.37□□□□□ -0.75
CLCN4-203ENST00000421085 C9orf172C9J069 976 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 RAMP3O60896 148 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 GZMBP10144 247 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 PAQR4Q8N4S7 273 aaPredicted RBP10.37□□□□□ -0.75
CLCN4-203ENST00000421085 ZNF479Q96JC4 524 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 SPAARA0A1B0GVQ0 90 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 ID3Q02535 119 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 TMEM144Q7Z5S9 345 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
CLCN4-203ENST00000421085 CFHR5Q9BXR6 569 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 OTORQ9NRC9 128 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 SELENOKQ9Y6D0 94 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 TMEM262E9PQX1 116 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
CLCN4-203ENST00000421085 LY6EQ16553 131 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 ZNF831Q5JPB2 1677 aa10.37□□□□□ -0.75
CLCN4-203ENST00000421085 TRAV8-4A0A0B4J246 113 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 HSD52Q0P140 79 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 SMRP1Q8NCR6 262 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 C1QTNF5Q9BXJ0 243 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 EPDR1Q9UM22 224 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 J3QW42 95 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 PAX2Q02962 417 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 CRIM1Q9NZV1 1036 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 LOC105371242A0A075B767 164 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 IGKV1D-8A0A087WSZ0 117 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 H7C1H1 209 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 PYYP10082 97 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 FAM201AQ5SY85 155 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 IGHV3OR16-8A0A075B7F1 116 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 IGKV1-9A0A0C4DH69 117 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
CLCN4-203ENST00000421085 ZNF703Q9H7S9 590 aaPredicted RBP10.36□□□□□ -0.75
CLCN4-203ENST00000421085 FBLN5Q9UBX5 448 aa10.36□□□□□ -0.75
CLCN4-203ENST00000421085 H3BRM9 83 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 RFPL3SP0C7P2 107 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 SCN2AQ99250 2005 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 NKX2-8O15522 239 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 IGKCP01834 107 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 FAM71F2Q6NXP2 309 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 JMJD8Q96S16 334 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms