RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 ZNF767PQ75MW2 155 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 SMIM15Q7Z3B0 74 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 ACOT12Q8WYK0 555 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 LZICQ8WZA0 190 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 OR8D2Q9GZM6 311 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 RNASE7Q9H1E1 156 aaKnown RBP1.96□□□□□ -2.1
VPS8-202ENST00000421069 BATF3Q9NR55 127 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 FBXL12Q9NXK8 326 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 IL36BQ9NZH7 164 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 RSL24D1Q9UHA3 163 aaKnown RBP1.96□□□□□ -2.1
VPS8-202ENST00000421069 STOML2Q9UJZ1 356 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 GINS2Q9Y248 185 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 ERGIC3Q9Y282 383 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 PIK3C2GO75747 1445 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 CLIP1P30622 1438 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 IQGAP2Q13576 1575 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 SLIT2O94813 1529 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 CLASP1Q7Z460 1538 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 KIAA0586Q9BVV6 1533 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 ITGB4P16144 1822 aa1.96□□□□□ -2.1
VPS8-202ENST00000421069 ATG2BQ96BY7 2078 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 ABCA5Q8WWZ7 1642 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 GOLGA3Q08378 1498 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 IGKV1D-43A0A0B4J1Z2 117 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 A0A0J9YW62 118 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 hADV38S2A0JD32 116 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 GGT3PA6NGU5 568 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 TMEM238C9JI98 176 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 KLRC4O43908 158 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 PDE6DO43924 150 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 DHFRP00374 187 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 CST2P09228 141 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 SERPINB1P30740 379 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
VPS8-202ENST00000421069 HINT1P49773 126 aaPredicted RBP1.95□□□□□ -2.1
VPS8-202ENST00000421069 ARF6P62330 175 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 HBA1P69905 142 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 SS18Q15532 418 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 IAH1Q2TAA2 248 aaPredicted RBP1.95□□□□□ -2.1
VPS8-202ENST00000421069 LIN52Q52LA3 116 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 HACD4Q5VWC8 232 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 ZNF705AQ6ZN79 300 aaPredicted RBP1.95□□□□□ -2.1
VPS8-202ENST00000421069 OR51A2Q8NGJ7 313 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 OR10X1Q8NGY0 326 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 OR5J2Q8NH18 312 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 NEK7Q8TDX7 302 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 FAM172AQ8WUF8 416 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 PYDC1Q8WXC3 89 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 MRPS24Q96EL2 167 aaKnown RBP1.95□□□□□ -2.1
VPS8-202ENST00000421069 BTF3L4Q96K17 158 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 KIFC1Q9BW19 673 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 C11orf68Q9H3H3 251 aaKnown RBP1.95□□□□□ -2.1
VPS8-202ENST00000421069 NMNAT1Q9HAN9 279 aaPredicted RBP1.95□□□□□ -2.1
VPS8-202ENST00000421069 GID8Q9NWU2 228 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 TP73-AS1Q9UF72 201 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 NAT8Q9UHE5 227 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 HHLA3Q9XRX5 114 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 TMEM56-RWDD3S4R434 201 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 SIPA1L1O43166 1804 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 ARHGAP5Q13017 1502 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 ERICH3Q5RHP9 1530 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 NUP155O75694 1391 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 CCNB3Q8WWL7 1395 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 TRPM6Q9BX84 2022 aa1.95□□□□□ -2.1
VPS8-202ENST00000421069 TEX14Q8IWB6 1497 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 EXOC1LA0A1B0GW35 172 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 PIRO00625 290 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 CREBL2O60519 120 aaPredicted RBP1.94□□□□□ -2.1
VPS8-202ENST00000421069 OR7C1O76099 320 aaPredicted RBP1.94□□□□□ -2.1
VPS8-202ENST00000421069 PRM2P04554 102 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 LGALS1P09382 135 aaKnown RBP1.94□□□□□ -2.1
VPS8-202ENST00000421069 DEFA4P12838 97 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 TPI1P60174 286 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 CCL20P78556 96 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 HES1Q14469 280 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 SMCO1Q147U7 214 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 CCDC58Q4VC31 144 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 AADACL3Q5VUY0 350 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 CLVS1Q8IUQ0 354 aaPredicted RBP1.94□□□□□ -2.1
VPS8-202ENST00000421069 ZNF676Q8N7Q3 588 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 OR4X2Q8NGF9 303 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 RMND5BQ96G75 393 aaPredicted RBP1.94□□□□□ -2.1
VPS8-202ENST00000421069 PHB2Q99623 299 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 NIPSNAP1Q9BPW8 284 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 Q9BRP9 147 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 TRABDQ9H4I3 376 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 UQCC1Q9NVA1 299 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 FAM32AQ9Y421 112 aaKnown RBP1.94□□□□□ -2.1
VPS8-202ENST00000421069 CDK13Q14004 1512 aaKnown RBP1.94□□□□□ -2.1
VPS8-202ENST00000421069 ROBO3Q96MS0 1386 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 ABCC10Q5T3U5 1492 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 WDR7Q9Y4E6 1490 aa1.94□□□□□ -2.1
VPS8-202ENST00000421069 CCDC171Q6TFL3 1326 aa1.93□□□□□ -2.1
VPS8-202ENST00000421069 SCAPERQ9BY12 1400 aa1.93□□□□□ -2.1
VPS8-202ENST00000421069 ABCC2Q92887 1545 aa1.93□□□□□ -2.1
VPS8-202ENST00000421069 HECW1Q76N89 1606 aa1.93□□□□□ -2.1
VPS8-202ENST00000421069 ADCY10Q96PN6 1610 aa1.93□□□□□ -2.1
VPS8-202ENST00000421069 BIVM-ERCC5R4GMW8 1640 aa1.93□□□□□ -2.1
VPS8-202ENST00000421069 DPRXA6NFQ7 191 aa1.93□□□□□ -2.1
VPS8-202ENST00000421069 RFPL4AA6NLU0 287 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms