RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 TRBV12-3P01733 135 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 P0C879 139 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 PRCDQ00LT1 54 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 KLF5Q13887 457 aaPredicted RBP13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 IZUMO4Q1ZYL8 232 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 RPEL1Q2QD12 228 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 LINC00299Q6ZSB3 139 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 SELENOHQ8IZQ5 122 aaKnown RBP13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 OR1L6Q8NGR2 347 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 TMEM230Q96A57 120 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 WWC2-AS2Q96NR7 200 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 PDCD10Q9BUL8 212 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 ELOVL1Q9BW60 279 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 F11RQ9Y624 299 aaKnown RBP13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 TMEM56-RWDD3S4R434 201 aa13.97□□□□□ -0.17
ECHDC3-202ENST00000420401 TRBV7-1A0A0A6YYK4 115 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 A0A0B4J293 547 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 CENPXA8MT69 81 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 K7EIL1 84 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 KRTAP10-11P60412 298 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 CNPY1Q3B7I2 92 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 TMEM268Q5VZI3 342 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 SLC25A24Q6NUK1 477 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 TMED4Q7Z7H5 227 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 IL22RA2Q969J5 263 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 SDHCQ99643 169 aaPredicted RBP13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 PLEKHA3Q9HB20 300 aa13.96□□□□□ -0.17
ECHDC3-202ENST00000420401 PIGBOS1A0A0B4J2F0 54 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 SAP30O75446 220 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 IFNA17P01571 189 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 SRPXP78539 464 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 ERHP84090 104 aaKnown RBP13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 TMEM187Q14656 261 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 TMEM128Q5BJH2 165 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 ACSM6Q6P461 480 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 LHFPL5Q8TAF8 219 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 OR4C12Q96R67 309 aa13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.95□□□□□ -0.18
ECHDC3-202ENST00000420401 ST8SIA3O43173 380 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 GGCTO75223 188 aaKnown RBP13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 IGHV3-23P01764 117 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 IL7P13232 177 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 SYNJ2BPP57105 145 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 CD69Q07108 199 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 RBMS2Q15434 407 aaKnown RBP13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 CLEC19AQ6UXS0 136 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 OR2C3Q8N628 320 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 SLC35G3Q8N808 338 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 OR1P1Q8NH06 330 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 VN1R17PQ8TDU5 208 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 C7orf50Q9BRJ6 194 aaKnown RBP13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 BATF3Q9NR55 127 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 DMRT1Q9Y5R6 373 aa13.94□□□□□ -0.18
ECHDC3-202ENST00000420401 A0A0G2JRQ6 117 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 LINC00854A0A1B0GVQ3 168 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 BMPR1BO00238 502 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 SUPT4H1P63272 117 aaKnown RBP13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 LGI3Q8N145 548 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 OR9G4Q8NGQ1 327 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 S100ZQ8WXG8 99 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 ENY2Q9NPA8 101 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 CACFD1Q9UGQ2 172 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 S4R3C0 116 aa13.93□□□□□ -0.18
ECHDC3-202ENST00000420401 MFSD2BA6NFX1 497 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 PPP5D1E7EU14 171 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 CLEC3BP05452 202 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 ARL3P36405 182 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 CCR6P51684 374 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 Q6ZRM9 215 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 CENPSQ8N2Z9 138 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 ZNF114Q8NC26 417 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 OR52E5Q8NH55 327 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 GPR146Q96CH1 333 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 CCDC140Q96MF4 163 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 PEMTQ9UBM1 199 aa13.92□□□□□ -0.18
ECHDC3-202ENST00000420401 A0A0B4J2A0 478 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 INS-IGF2F8WCM5 200 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 NDUFB6O95139 128 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 VAMP1P23763 118 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 SNCAP37840 140 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 MFAP2P55001 183 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 SPCS3P61009 180 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 AARDQ4LEZ3 155 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 ZNF502Q8TBZ5 544 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 CCDC32Q9BV29 185 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 PRR13Q9NZ81 148 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 CACNG5Q9UF02 275 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 SHPKQ9UHJ6 478 aa13.91□□□□□ -0.18
ECHDC3-202ENST00000420401 OR2C1O95371 312 aa13.9□□□□□ -0.18
ECHDC3-202ENST00000420401 HOXA1P49639 335 aaPredicted RBP13.9□□□□□ -0.18
ECHDC3-202ENST00000420401 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.18
ECHDC3-202ENST00000420401 UBE2MP61081 183 aaKnown RBP13.9□□□□□ -0.18
ECHDC3-202ENST00000420401 GPHB5Q86YW7 130 aa13.9□□□□□ -0.18
ECHDC3-202ENST00000420401 PTTG2Q9NZH5 202 aa13.9□□□□□ -0.18
ECHDC3-202ENST00000420401 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
ECHDC3-202ENST00000420401 HLA-AP01891 365 aaKnown RBP13.89□□□□□ -0.19
ECHDC3-202ENST00000420401 SULT1A3P0DMM9 295 aa13.89□□□□□ -0.19
ECHDC3-202ENST00000420401 SULT1A4P0DMN0 295 aa13.89□□□□□ -0.19
ECHDC3-202ENST00000420401 FAM106AQ4KMX7 169 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms