RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 S100A10P60903 97 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 FAM3AP98173 230 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 DHRS2Q13268 280 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ARHGAP11BQ3KRB8 267 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF718Q3SXZ3 478 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 MRPL55Q7Z7F7 128 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 PPP1R27Q86WC6 154 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 C17orf82Q86X59 251 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ST6GALNAC3Q8NDV1 305 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR52E2Q8NGJ4 325 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 FGGYQ96C11 551 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 S100A16Q96FQ6 103 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 NMES1Q9C002 83 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ISG20L2Q9H9L3 353 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 RFNGQ9Y644 331 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 URB1O60287 2271 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 IGHV1OR15-1A0A075B7D0 117 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF860A6NHJ4 632 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 FTCDNL1E5RQL4 147 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR7C2O60412 319 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OPN1SWP03999 348 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 AKAIN1P0CW23 69 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 TAS2R20P59543 309 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ENDOGQ14249 297 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ACSM3Q53FZ2 586 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM69Q5SWH9 247 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF324BQ6AW86 544 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 RPL22L1Q6P5R6 122 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 UNQ5815/PRO19632Q6UWF5 114 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 MBOAT2Q6ZWT7 520 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 NOTCH2NLQ7Z3S9 236 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 HMGN2P46Q86SG4 172 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 NIT1Q86X76 327 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 C20orf196Q8IYI0 205 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ZADH2Q8N4Q0 377 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 CCDC71LQ8N9Z2 235 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR51A2Q8NGJ7 313 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR51G1Q8NGK1 321 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 PATE1Q8WXA2 126 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF501Q96CX3 271 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 IMMP2LQ96T52 175 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 FGF22Q9HCT0 170 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 CES1P1Q9UKY3 287 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 LOC400499M0QZD8 3231 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 SMG1Q96Q15 3661 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 IGLV1-36A0A0B4J1U3 117 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 A0A0B4J2E0 115 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 RBFOX2O43251 390 aaKnown RBP eCLIP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ZNF253O75346 499 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 GLSO94925 669 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 SLPIP03973 132 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 CTSDP07339 412 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR10J4P0C629 311 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 FUT3P21217 361 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 KIR2DS4P43632 304 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM249Q2WGJ8 235 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 COMMD6Q7Z4G1 85 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 LINC01555Q8NAE3 123 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR51D1Q8NGF3 324 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR52L1Q8NGH7 329 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR4P4Q8NGL7 312 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR2A1Q8NGT9 310 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 DOK4Q8TEW6 326 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 TVP23CQ96ET8 276 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 PGLYRP3Q96LB9 341 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 PYGO2Q9BRQ0 406 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 TMEM38BQ9NVV0 291 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 BET1LQ9NYM9 111 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 CCDC88CQ9P219 2028 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 NOP16Q9Y3C1 178 aaKnown RBP3.91□□□□□ -1.78
VPS13A-207ENST00000419472 OR51B2Q9Y5P1 312 aa3.91□□□□□ -1.78
VPS13A-207ENST00000419472 ZZEF1O43149 2961 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 CACNA1EQ15878 2313 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 SPAG17Q6Q759 2223 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 A0A1W2PRS3 328 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 OR4C45A6NMZ5 311 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 CDK2P24941 298 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 CTRLP40313 264 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 TAS2R43P59537 309 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 CKS1BP61024 79 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 SSBP1Q04837 148 aaKnown RBP3.9□□□□□ -1.78
VPS13A-207ENST00000419472 RPL7L1Q6DKI1 246 aaKnown RBP3.9□□□□□ -1.78
VPS13A-207ENST00000419472 LCN12Q6JVE5 192 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 OLIG3Q7RTU3 272 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 CDC20BQ86Y33 519 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 LFNGQ8NES3 379 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 OR2T27Q8NH04 317 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 OR7D2Q96RA2 312 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 VAMP8Q9BV40 100 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 UQCR10Q9UDW1 63 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 SLC22A13Q9Y226 551 aa3.9□□□□□ -1.78
VPS13A-207ENST00000419472 MRPS16Q9Y3D3 137 aaKnown RBP3.9□□□□□ -1.78
VPS13A-207ENST00000419472 TEX15Q9BXT5 2789 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 SPTA1P02549 2419 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 LOC102724200A0A096LPH7 203 aaPredicted RBP3.9□□□□□ -1.79
VPS13A-207ENST00000419472 ARL6IP5O75915 188 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 ESDP10768 282 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 PTHLHP12272 177 aa3.9□□□□□ -1.79
VPS13A-207ENST00000419472 RPS21P63220 83 aaKnown RBP3.9□□□□□ -1.79
VPS13A-207ENST00000419472 LY6DQ14210 128 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms