RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PGLYRP1O75594 196 aaPredicted RBP5.3□□□□□ -1.56
HMGN1-205ENST00000419378 TPPPO94811 219 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 HPRT1P00492 218 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 PRH1P02810 166 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 MYOD1P15172 320 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 NQO2P16083 231 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 HLA-GP17693 338 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 MAS1LP35410 378 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 RPL27AP46776 148 aaKnown RBP5.3□□□□□ -1.56
HMGN1-205ENST00000419378 RPL5P46777 297 aaKnown RBP5.3□□□□□ -1.56
HMGN1-205ENST00000419378 TMBIM6P55061 237 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 TAS2R31P59538 309 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 TSPAN5P62079 268 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 RPL8P62917 257 aaKnown RBP5.3□□□□□ -1.56
HMGN1-205ENST00000419378 RHOGP84095 191 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF45Q02386 682 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 POU2AF1Q16633 256 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 VAX1Q5SQQ9 334 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 CMTM1Q8IZ96 169 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 TTC9CQ8N5M4 171 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 OR52I2Q8NH67 350 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 OR4A5Q8NH83 315 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 DYNC2LI1Q8TCX1 351 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 CD300LFQ8TDQ1 290 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 C15orf40Q8WUR7 153 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 ABHD1Q96SE0 405 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 HRASLSQ9HDD0 168 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 COMMD9Q9P000 198 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 CCDC59Q9P031 241 aaKnown RBP5.3□□□□□ -1.56
HMGN1-205ENST00000419378 KLK11Q9UBX7 282 aa5.3□□□□□ -1.56
HMGN1-205ENST00000419378 ZMAT5Q9UDW3 170 aaKnown RBP5.3□□□□□ -1.56
HMGN1-205ENST00000419378 TRBV9A0A0B4J1U6 114 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 TRAV3A0A0B4J244 114 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 FAM223BA6NKX1 122 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 UPK2O00526 184 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 CTDSP2O14595 271 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 SAP30O75446 220 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 TRBV12-3P01733 135 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 CLEC3BP05452 202 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF735P0CB33 412 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 AREGP15514 252 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 RPA2P15927 270 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 TBPP20226 339 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 EDN2P20800 178 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 ZP3P21754 424 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 F2RP25116 425 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 TNFSF8P32971 234 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 INSL3P51460 131 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 OR2B8PP59922 312 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 ERVK-16P61578 105 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 PHLDA2Q53GA4 152 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 RNASE10Q5GAN6 216 aaKnown RBP5.29□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF343Q6P1L6 599 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 C19orf35Q6ZS72 473 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF429Q86V71 674 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 FAM223AQ8IWN6 122 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 SLC38A6Q8IZM9 456 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 DMBX1Q8NFW5 382 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 FCAMRQ8WWV6 532 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 ISOC1Q96CN7 298 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 DGCR14Q96DF8 476 aaKnown RBP5.29□□□□□ -1.56
HMGN1-205ENST00000419378 USMG5Q96IX5 58 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 RANGRFQ9HD47 186 aaPredicted RBP5.29□□□□□ -1.56
HMGN1-205ENST00000419378 SLC2A9Q9NRM0 540 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 MTFP1Q9UDX5 166 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF257Q9Y2Q1 563 aa5.29□□□□□ -1.56
HMGN1-205ENST00000419378 HUWE1Q7Z6Z7 4374 aaKnown RBP5.29□□□□□ -1.56
HMGN1-205ENST00000419378 GABARAPH6UMI1 98 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 OR2J3O76001 311 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 CD74P04233 296 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 CD3DP04234 171 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 IFNA6P05013 189 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 CRYGCP07315 174 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 FGF2P09038 288 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 CTRB1P17538 263 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 PSMB6P28072 239 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 LPAR6P43657 344 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 TAS2R19P59542 299 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 MRPS10P82664 201 aaKnown RBP5.28□□□□□ -1.56
HMGN1-205ENST00000419378 ATP5G2Q06055 141 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 EXOSC2Q13868 293 aaKnown RBP5.28□□□□□ -1.56
HMGN1-205ENST00000419378 IL18Q14116 193 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 C15orf32Q32M92 178 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 ZNF585BQ52M93 769 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 DEFB121Q5J5C9 76 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 SERTAD4-AS1Q5TG53 156 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 CTRB2Q6GPI1 263 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 LPCAT3Q6P1A2 487 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 TBC1D26Q86UD7 250 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 SLC25A42Q86VD7 318 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 LHFPL1Q86WI0 220 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 ARRDC1Q8N5I2 433 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 NECAP1Q8NC96 275 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 OR4D10Q8NGI6 311 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 TMEM170AQ8WVE7 144 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 SMIM4Q8WVI0 70 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 COMMD5Q9GZQ3 224 aa5.28□□□□□ -1.56
HMGN1-205ENST00000419378 SLIRPQ9GZT3 109 aaKnown RBP5.28□□□□□ -1.56
HMGN1-205ENST00000419378 C6orf62Q9GZU0 229 aaPredicted RBP5.28□□□□□ -1.56
HMGN1-205ENST00000419378 PEF1Q9UBV8 284 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms