RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PQLC2Q6ZP29 291 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 C11orf42Q8N5U0 333 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SRSF8Q9BRL6 282 aaKnown RBP11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PARLQ9H300 379 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PRORYQ9H606 182 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SLC45A2Q9UMX9 530 aa11.8□□□□□ -0.52
HLA-DPA1-242ENST00000419277 M0R1W7 72 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PAGE4O60829 102 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PLAUP00749 431 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 IGLV2-23P01705 113 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SELENOTP62341 195 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 MIC13Q5XKP0 118 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 LY6G5BQ8NDX9 201 aa11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 METTL1Q9UBP6 276 aaKnown RBP11.79□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PPIAL4CA0A0B4J2A2 164 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TMEM8BA6NDV4 472 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PPP1R2P9O14990 202 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 GOSR1O95249 250 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 S100A8P05109 93 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PPIAL4GP0DN37 164 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 S100PP25815 95 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SLC16A13Q7RTY0 426 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 OR4P4Q8NGL7 312 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 GATAD1Q8WUU5 269 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TMEM190Q8WZ59 177 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PFDN5Q99471 154 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 TNCP24821 2201 aa11.78□□□□□ -0.52
HLA-DPA1-242ENST00000419277 BUB1B-PAK6H3BSN5 160 aa11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 UBE2CO00762 179 aa11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ACTL6BO94805 426 aa11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 ARL14EPLP0DKL9 152 aa11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 AREGP15514 252 aa11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 CEACAM3P40198 252 aa11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 C22orf15Q8WYQ4 148 aa11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 SAV1Q9H4B6 383 aaPredicted RBP11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PATZ1Q9HBE1 687 aaKnown RBP11.77□□□□□ -0.52
HLA-DPA1-242ENST00000419277 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C1orf122Q6ZSJ8 110 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 KIR3DL3Q8N743 410 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 RPUSD4Q96CM3 377 aaKnown RBP11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 UHRF2Q96PU4 802 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR5B12Q96R08 314 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 IMMP2LQ96T52 175 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 TMPRSS5Q9H3S3 457 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ZNF430Q9H8G1 570 aaPredicted RBP11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 FUT9Q9Y231 359 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 INSIG2Q9Y5U4 225 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 LY96Q9Y6Y9 160 aa11.77□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C5orf52A6NGY3 159 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR5G3P0C626 314 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 COL8A2P25067 703 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 GCHFRP30047 84 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 BPIFB3P59826 476 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 RPL23P62829 140 aaKnown RBP11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 GAMTQ14353 236 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ADIRFQ15847 76 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR1L4Q8NGR5 311 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 Q8WTZ3 238 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C11orf52Q96A22 123 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 RPEQ96AT9 228 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C1orf159Q96HA4 380 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
HLA-DPA1-242ENST00000419277 IGHV1-3A0A0C4DH29 117 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 HMGB3O15347 200 aaKnown RBP11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C1QTNF9P0C862 333 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 IGFBP2P18065 325 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 GRNP28799 593 aaKnown RBP11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 REG1BP48304 166 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C4orf17Q53FE4 359 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 UNQ6494/PRO21346Q6UXR6 183 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR11H6Q8NGC7 330 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ABHD5Q8WTS1 349 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OOSP1A8MZH6 123 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C9JCJ5 164 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 H7BYZ3 331 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 LINC00869P0C866 280 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 RPS10P46783 165 aaKnown RBP11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 PRSS8Q16651 343 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 GCSAMLQ5JQS6 135 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 CST9LP1Q5W188 147 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 THAP8Q8NA92 274 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 FAM210BQ96KR6 192 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 AP4M1O00189 453 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SLC25A17O43808 307 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 IGHV2-5P01817 119 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 RPL27AP46776 148 aaKnown RBP11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ZNF674Q2M3X9 581 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 FAM78BQ5VT40 261 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 LINC00518Q8N0U6 118 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR1L6Q8NGR2 347 aa11.74□□□□□ -0.53
HLA-DPA1-242ENST00000419277 CRYGBP07316 175 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 LCN2P80188 198 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 WT1-ASQ06250 92 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 CCDC144NLQ6NUI1 221 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms