RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNF22P17026 224 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 SPI1P17947 270 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 MSNP26038 577 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 CRABP2P29373 138 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 FOXA1P55317 472 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 KLF3P57682 345 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 RPL30P62888 115 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 HBA1P69905 142 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TSNQ15631 228 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 KISS1Q15726 138 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 GLT8D1Q68CQ7 371 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 SSX8Q7RTT4 187 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 C3orf22Q8N5N4 141 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 Q8NAQ8 132 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 OR10A6Q8NH74 314 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 MUC7Q8TAX7 377 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 MRPL30Q8TCC3 161 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 GPR119Q8TDV5 335 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 ROPN1LQ96C74 230 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZHX1-C8orf76Q96EF9 292 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 CARD19Q96LW7 228 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 OR8D2Q9GZM6 311 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 C20orf27Q9GZN8 174 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 SH3BGRL3Q9H299 93 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 EFCAB1Q9HAE3 211 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 ACER3Q9NUN7 267 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 AMMECR1Q9Y4X0 333 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TCHHQ07283 1943 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 SUPT6HQ7KZ85 1726 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 HMGXB3Q12766 1538 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 FMN1Q68DA7 1419 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 DSCAMO60469 2012 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 KDM5CP41229 1560 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 NUP205Q92621 2012 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 TEX14Q8IWB6 1497 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 MBD5Q9P267 1494 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 PRORSD1PA6NEY8 169 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 TRAPPC2LH3BP13 241 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 BUB1B-PAK6H3BSN5 160 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 PIRO00625 290 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 ORC5O43913 435 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 OR2J2O76002 312 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 IGHV3-53P01767 116 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 CRHP06850 196 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF705DP0CH99 300 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 ERP29P30040 261 aaKnown RBP1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 CA5AP35218 305 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 PHBP35232 272 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 GABRA2P47869 451 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 RAB13P51153 203 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 CAV1Q03135 178 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 FOXF1Q12946 379 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 HTR4Q13639 388 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 SURF2Q15527 256 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 LTC4SQ16873 150 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 PYDC2Q56P42 97 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 ZNF660Q6AZW8 331 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 Q6Q795 121 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 RPRMLQ8N4K4 120 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 EIF4E3Q8N5X7 224 aaKnown RBP1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 C12orf29Q8N999 325 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 CNEP1R1Q8N9A8 125 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 OR5C1Q8NGR4 320 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 GRPEL2Q8TAA5 225 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 FNDC9Q8TBE3 224 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 H1FXQ92522 213 aaKnown RBP1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 SLC7A6Q92536 515 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 LRTM1Q9HBL6 345 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 SNX12Q9UMY4 172 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 RBM7Q9Y580 266 aaKnown RBP1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 TRAPPC1Q9Y5R8 145 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 KDM6BO15054 1643 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 CC2D2AQ9P2K1 1620 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 UGGT2Q9NYU1 1516 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 DOCK3Q8IZD9 2030 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 CUL7Q14999 1698 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 SAMD9Q5K651 1589 aa1.64□□□□□ -2.15
HMGB1P49-201ENST00000418882 CFTRP13569 1480 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 PLEKHH2Q8IVE3 1493 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 NEO1Q92859 1461 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 ROCK2O75116 1388 aaKnown RBP1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 LAMC1P11047 1609 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 KIF14Q15058 1648 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 CLASP1Q7Z460 1538 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 EHBP1L1Q8N3D4 1523 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 A0A1B0GU33 70 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 MAP1LC3B2A6NCE7 125 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 DPRXA6NFQ7 191 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 SDHAF1A6NFY7 115 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 A8MWP6 167 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 G3V2T6 193 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 LEPROTO15243 131 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 IGHV1-69P01742 117 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 SLC25A16P16260 332 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 CRHBPP24387 322 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 CRABP1P29762 137 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 RBM11P57052 281 aaKnown RBP1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 TCTAP57738 103 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 CCL20P78556 96 aa1.63□□□□□ -2.15
HMGB1P49-201ENST00000418882 AKR1C8PQ5T2L2 129 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms