RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 LAMTOR1Q6IAA8 161 aa13.79□□□□□ -0.2
VPS16-204ENST00000417508 H2BFWTQ7Z2G1 175 aa13.79□□□□□ -0.2
VPS16-204ENST00000417508 TBC1D26Q86UD7 250 aa13.79□□□□□ -0.2
VPS16-204ENST00000417508 OR2C3Q8N628 320 aa13.79□□□□□ -0.2
VPS16-204ENST00000417508 OR4A16Q8NH70 328 aa13.79□□□□□ -0.2
VPS16-204ENST00000417508 AP3S1Q92572 193 aa13.79□□□□□ -0.2
VPS16-204ENST00000417508 SEC22AQ96IW7 307 aa13.79□□□□□ -0.2
VPS16-204ENST00000417508 SPAG8Q99932 426 aaPredicted RBP13.79□□□□□ -0.2
VPS16-204ENST00000417508 LOC102724200A0A096LPH7 203 aaPredicted RBP13.78□□□□□ -0.2
VPS16-204ENST00000417508 TSPAN4O14817 238 aa13.78□□□□□ -0.2
VPS16-204ENST00000417508 HPGDSO60760 199 aa13.78□□□□□ -0.2
VPS16-204ENST00000417508 C15orf40Q8WUR7 153 aa13.78□□□□□ -0.2
VPS16-204ENST00000417508 ZNF486Q96H40 463 aaPredicted RBP13.78□□□□□ -0.2
VPS16-204ENST00000417508 TXN2Q99757 166 aa13.78□□□□□ -0.2
VPS16-204ENST00000417508 GGTLC1Q9BX51 225 aa13.78□□□□□ -0.2
VPS16-204ENST00000417508 RETNQ9HD89 108 aa13.78□□□□□ -0.2
VPS16-204ENST00000417508 K7EIM0 57 aa13.77□□□□□ -0.21
VPS16-204ENST00000417508 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 FAM25AB3EWG3 89 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 FAM25CB3EWG5 89 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 FAM25GB3EWG6 89 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 ZNF182P17025 639 aaPredicted RBP13.76□□□□□ -0.21
VPS16-204ENST00000417508 FCGR2BP31994 310 aaPredicted RBP13.76□□□□□ -0.21
VPS16-204ENST00000417508 RND3P61587 244 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 HSPE1P61604 102 aaKnown RBP13.76□□□□□ -0.21
VPS16-204ENST00000417508 RELQ04864 619 aaPredicted RBP13.76□□□□□ -0.21
VPS16-204ENST00000417508 Q56UQ5 140 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 FAM110AQ9BQ89 295 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 CHRDL1Q9BU40 450 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 SELENOKQ9Y6D0 94 aa13.76□□□□□ -0.21
VPS16-204ENST00000417508 DBX1A6NMT0 343 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 F8W735 103 aaPredicted RBP13.75□□□□□ -0.21
VPS16-204ENST00000417508 ATG12O94817 140 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 CTSGP08311 255 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 TBPP20226 339 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 ADMP35318 185 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 MFAP4P55083 255 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 ERHP84090 104 aaKnown RBP13.75□□□□□ -0.21
VPS16-204ENST00000417508 PRCDQ00LT1 54 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 ARRDC1Q8N5I2 433 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 ZNF114Q8NC26 417 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 CSMD3Q7Z407 3707 aa13.75□□□□□ -0.21
VPS16-204ENST00000417508 IGHV3-21A0A0B4J1V1 117 aa13.74□□□□□ -0.21
VPS16-204ENST00000417508 NUPL2O15504 423 aaKnown RBP13.74□□□□□ -0.21
VPS16-204ENST00000417508 IGKV1-39P01597 117 aa13.74□□□□□ -0.21
VPS16-204ENST00000417508 IGKV1D-39P04432 117 aa13.74□□□□□ -0.21
VPS16-204ENST00000417508 CTF1Q16619 201 aa13.74□□□□□ -0.21
VPS16-204ENST00000417508 RNASE10Q5GAN6 216 aaKnown RBP13.74□□□□□ -0.21
VPS16-204ENST00000417508 UBAC2Q8NBM4 344 aa13.74□□□□□ -0.21
VPS16-204ENST00000417508 C20orf24Q9BUV8 137 aa13.74□□□□□ -0.21
VPS16-204ENST00000417508 I3L2K1 104 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 M0QYG6 137 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 UBE2CO00762 179 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 GABARAPO95166 117 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 PGAM2P15259 253 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 CMC4P56277 68 aaPredicted RBP13.73□□□□□ -0.21
VPS16-204ENST00000417508 LHFPL1Q86WI0 220 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 MRGPRFQ96AM1 343 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 OVOL2Q9BRP0 275 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 KLK11Q9UBX7 282 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 MTFP1Q9UDX5 166 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
VPS16-204ENST00000417508 OR4C46A6NHA9 309 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 APOC4P55056 127 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 Q6ZWC4 215 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 MISP3Q96FF7 219 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 OR10C1Q96KK4 312 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 EXTL2Q9UBQ6 330 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 TP53TG1Q9Y2A0 90 aa13.72□□□□□ -0.21
VPS16-204ENST00000417508 DYNC2H1Q8NCM8 4307 aaKnown RBP13.72□□□□□ -0.21
VPS16-204ENST00000417508 KIR2DL5BA0A0G2JN68 375 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 KIR2DL5BA0A0G2JPC4 375 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 INS-IGF2F8WCM5 200 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 B3GALNT1O75752 331 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 JTBO76095 146 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 CD3DP04234 171 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 PIGPP57054 158 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 KIR2DL5AQ8N109 375 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 OR52I2Q8NH67 350 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 KIR2DL5BQ8NHK3 375 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 TERB2Q8NHR7 220 aa13.71□□□□□ -0.21
VPS16-204ENST00000417508 NXF2Q9GZY0 626 aaKnown RBP13.71□□□□□ -0.21
VPS16-204ENST00000417508 MT-CO2P00403 227 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 CD5P06127 495 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 SNCAP37840 140 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 SSBP1Q04837 148 aaKnown RBP13.7□□□□□ -0.22
VPS16-204ENST00000417508 GPR107Q5VW38 600 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 CCDC71LQ8N9Z2 235 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 TMEM229BQ8NBD8 167 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 TMEM116Q8NCL8 245 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 ABHD1Q96SE0 405 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 NAA50Q9GZZ1 169 aaKnown RBP13.7□□□□□ -0.22
VPS16-204ENST00000417508 COPZ2Q9P299 210 aa13.7□□□□□ -0.22
VPS16-204ENST00000417508 TRAV14DV4A0A0A6YYC5 116 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 IGHV7-4-1A0A0J9YVY3 117 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 C3orf85A0A1B0GTC6 90 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 CHEK1O14757 476 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 GNG7O60262 68 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms