RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PUSL1Q8N0Z8 303 aaKnown RBP9.82□□□□□ -0.84
LINC00339-202ENST00000416769 COQ8AQ8NI60 647 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 VSTM2AQ8TAG5 236 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 ZNF431Q8TF32 576 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-202ENST00000416769 RBPMSQ93062 196 aaKnown RBP9.82□□□□□ -0.84
LINC00339-202ENST00000416769 SEC22AQ96IW7 307 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 SEC22CQ9BRL7 303 aa9.82□□□□□ -0.84
LINC00339-202ENST00000416769 DUXBA0A1W2PPF3 345 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 A8MZ25 164 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 OR2A4O95047 310 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 KRASP01116 189 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 TRGV3P03979 118 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 ERVK-16P61578 105 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 PLGLAQ15195 96 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 ANKRD55Q3KP44 614 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 TMEM268Q5VZI3 342 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 DMBX1Q8NFW5 382 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 OR52B4Q8NGK2 314 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 OR4A5Q8NH83 315 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 GRPEL2Q8TAA5 225 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 LHFPL5Q8TAF8 219 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 MITD1Q8WV92 249 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 LSM10Q969L4 123 aaKnown RBP9.81□□□□□ -0.84
LINC00339-202ENST00000416769 OR2A7Q96R45 310 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 PHB2Q99623 299 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 BET1LQ9NYM9 111 aa9.81□□□□□ -0.84
LINC00339-202ENST00000416769 METTL1Q9UBP6 276 aaKnown RBP9.81□□□□□ -0.84
LINC00339-202ENST00000416769 MARCH11A6NNE9 402 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 SLC25A17O43808 307 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 CREBL2O60519 120 aaPredicted RBP9.8□□□□□ -0.84
LINC00339-202ENST00000416769 SAA1P0DJI8 122 aaPredicted RBP9.8□□□□□ -0.84
LINC00339-202ENST00000416769 G6PCP35575 357 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 SYNJ2BPP57105 145 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 PJVKQ0ZLH3 352 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 OR4A47Q6IF82 309 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 FAM219AQ8IW50 185 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 VKORC1L1Q8N0U8 176 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 C12orf45Q8N5I9 185 aaPredicted RBP9.8□□□□□ -0.84
LINC00339-202ENST00000416769 OR5T1Q8NG75 326 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 TMEM167AQ8TBQ9 72 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 WFDC10AQ9H1F0 79 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 PRR13Q9NZ81 148 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
LINC00339-202ENST00000416769 C7orf66A4D0T2 115 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 DBX1A6NMT0 343 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 UPK2O00526 184 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 IGKV1-5P01602 117 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 FGF2P09038 288 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 P0C879 139 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 APELAP0DMC3 54 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 EDN2P20800 178 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 TATDN3Q17R31 274 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 SSX9Q7RTT3 188 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 H2BFWTQ7Z2G1 175 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 LYZL2Q7Z4W2 148 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 SLC35G3Q8N808 338 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 RRNAD1Q96FB5 475 aaKnown RBP9.79□□□□□ -0.84
LINC00339-202ENST00000416769 PLEKHA3Q9HB20 300 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 ZNF355PQ9NSJ1 428 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 TMED3Q9Y3Q3 217 aa9.79□□□□□ -0.84
LINC00339-202ENST00000416769 KBTBD11O94819 623 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 CSN3P07498 182 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 MAS1LP35410 378 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 AKR1C2P52895 323 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
LINC00339-202ENST00000416769 PRSS8Q16651 343 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 MRGPRG-AS1Q2M3A8 158 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 AKIRIN2Q53H80 203 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 ZNF562Q6V9R5 426 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 MMD2Q8IY49 270 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 OR9G4Q8NGQ1 327 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 GPR146Q96CH1 333 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 ELOVL1Q9BW60 279 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 HIPK2Q9H2X6 1198 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
LINC00339-202ENST00000416769 A0A0B4J293 547 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 SNAPC5O75971 98 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 IFNA21P01568 189 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 HOXB5P09067 269 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 SLC25A6P12236 298 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 HLA-GP17693 338 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 FXYD3Q14802 87 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 Q6ZNX1 250 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 UXS1Q8NBZ7 420 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 OR4A16Q8NH70 328 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 RNASE11Q8TAA1 199 aaKnown RBP9.77□□□□□ -0.85
LINC00339-202ENST00000416769 ZNF430Q9H8G1 570 aaPredicted RBP9.77□□□□□ -0.85
LINC00339-202ENST00000416769 FKBP11Q9NYL4 201 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 ALG5Q9Y673 324 aa9.77□□□□□ -0.85
LINC00339-202ENST00000416769 TRAV3A0A0B4J244 114 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 A0A1B0GU03 582 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 BRI3O95415 125 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 RPL8P62917 257 aaKnown RBP9.76□□□□□ -0.85
LINC00339-202ENST00000416769 TMEM267Q0VDI3 215 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-202ENST00000416769 NMSQ5H8A3 153 aa9.76□□□□□ -0.85
LINC00339-202ENST00000416769 GGNBP1Q5YKI7 109 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms