RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PI3P19957 117 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 PLET1Q6UQ28 207 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 LHFPL1Q86WI0 220 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 OR52I2Q8NH67 350 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 SCARB1Q8WTV0 552 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 MRGPRFQ96AM1 343 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 KLK11Q9UBX7 282 aa11.29□□□□□ -0.6
UBXN4-203ENST00000416538 UCP3P55916 312 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 TSPAN5P62079 268 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 GPR107Q5VW38 600 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 OR4D10Q8NGI6 311 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 ABHD1Q96SE0 405 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 MIXL1Q9H2W2 232 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 DNAH1Q9P2D7 4330 aa11.28□□□□□ -0.6
UBXN4-203ENST00000416538 FAM25AB3EWG3 89 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 FAM25CB3EWG5 89 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 FAM25GB3EWG6 89 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 SNAPC5O75971 98 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 IGKV1-5P01602 117 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 RORCP51449 518 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 LCE2CQ5TA81 110 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 HSD17B13Q7Z5P4 300 aaPredicted RBP11.27□□□□□ -0.61
UBXN4-203ENST00000416538 SLC38A6Q8IZM9 456 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 OR5B3Q8NH48 314 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 PALMDQ9NP74 551 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 FAM212BQ9NTI7 297 aaPredicted RBP11.27□□□□□ -0.61
UBXN4-203ENST00000416538 C21orf62Q9NYP8 219 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 THYN1Q9P016 225 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 EXTL2Q9UBQ6 330 aa11.27□□□□□ -0.61
UBXN4-203ENST00000416538 LCE6AA0A183 80 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 SMIM31A0A1B0GVY4 71 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 ZNF207O43670 478 aaKnown RBP11.26□□□□□ -0.61
UBXN4-203ENST00000416538 CD3DP04234 171 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 P0C879 139 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 ALDH3B2P48448 385 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 PPP5CP53041 499 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 ELLP55199 621 aaPredicted RBP11.26□□□□□ -0.61
UBXN4-203ENST00000416538 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 OR2C3Q8N628 320 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 OR52B4Q8NGK2 314 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
UBXN4-203ENST00000416538 TP53RKQ96S44 253 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 MRPL27Q9P0M9 148 aaKnown RBP11.26□□□□□ -0.61
UBXN4-203ENST00000416538 MTFP1Q9UDX5 166 aa11.26□□□□□ -0.61
UBXN4-203ENST00000416538 I3L2K1 104 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 IGHV3-48P01763 117 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 ZNF182P17025 639 aaPredicted RBP11.25□□□□□ -0.61
UBXN4-203ENST00000416538 RND3P61587 244 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 SPCS2Q15005 226 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 SLC16A13Q7RTY0 426 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 OR1P1Q8NH06 330 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 MARC2Q969Z3 335 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 DAZ1Q9NQZ3 744 aaKnown RBP11.25□□□□□ -0.61
UBXN4-203ENST00000416538 UFC1Q9Y3C8 167 aa11.25□□□□□ -0.61
UBXN4-203ENST00000416538 TRAV25A0A0B4J276 109 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 A0A0G2JRQ6 117 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 NDUFA4O00483 81 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 IFNA6P05013 189 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 CTSGP08311 255 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 ODF3L2Q3SX64 289 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 RNASE10Q5GAN6 216 aaKnown RBP11.24□□□□□ -0.61
UBXN4-203ENST00000416538 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 LPCAT3Q6P1A2 487 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 H2BFWTQ7Z2G1 175 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 TMEM56Q96MV1 263 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 C5orf66Q9H5L9 145 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 UBQLN2Q9UHD9 624 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
UBXN4-203ENST00000416538 CD74P04233 296 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 PGAM2P15259 253 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 PIGPP57054 158 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 Q56UQ5 140 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 MZT2AQ6P582 158 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 SPSB3Q6PJ21 355 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 ARRDC1Q8N5I2 433 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 OR1L6Q8NGR2 347 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 AP3S1Q92572 193 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 MISP3Q96FF7 219 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 ATP6V0BQ99437 205 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 C20orf24Q9BUV8 137 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 FKBP11Q9NYL4 201 aa11.23□□□□□ -0.61
UBXN4-203ENST00000416538 A0A0B4J293 547 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 CTDSP2O14595 271 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 TSPAN4O14817 238 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 CYB5BO43169 146 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 MT-CO2P00403 227 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 OR4A16Q8NH70 328 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 SPAG8Q99932 426 aaPredicted RBP11.22□□□□□ -0.61
UBXN4-203ENST00000416538 OVOL2Q9BRP0 275 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 GGTLC1Q9BX51 225 aa11.22□□□□□ -0.61
UBXN4-203ENST00000416538 MRPS26Q9BYN8 205 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms