RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 OR4A5Q8NH83 315 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 LGALS14Q8TCE9 139 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 TRIM63Q969Q1 353 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 S100A16Q96FQ6 103 aaKnown RBP6.84□□□□□ -1.31
LINC01238-201ENST00000416204 GFI1Q99684 422 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 MARVELD1Q9BSK0 173 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 C20orf24Q9BUV8 137 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 CSTL1Q9H114 145 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 C5orf66Q9H5L9 145 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 MRPL27Q9P0M9 148 aaKnown RBP6.84□□□□□ -1.31
LINC01238-201ENST00000416204 UFC1Q9Y3C8 167 aa6.84□□□□□ -1.31
LINC01238-201ENST00000416204 DNAH5Q8TE73 4624 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 IGHV4-4A0A075B6R2 117 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 NAP1L6A6NFF2 107 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 OR2T8A6NH00 312 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 NPIPB5A8MRT5 1133 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 FOXI3A8MTJ6 420 aaPredicted RBP6.83□□□□□ -1.32
LINC01238-201ENST00000416204 TSPAN4O14817 238 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 CA1P00915 261 aaPredicted RBP6.83□□□□□ -1.32
LINC01238-201ENST00000416204 RPL30P62888 115 aaKnown RBP6.83□□□□□ -1.32
LINC01238-201ENST00000416204 Q6ZTC4 211 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 ZNF767PQ75MW2 155 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 TOMM5Q8N4H5 51 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 GBGT1Q8N5D6 347 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 ZBTB8BQ8NAP8 495 aaPredicted RBP6.83□□□□□ -1.32
LINC01238-201ENST00000416204 OSR1Q8TAX0 266 aaPredicted RBP6.83□□□□□ -1.32
LINC01238-201ENST00000416204 SMIM4Q8WVI0 70 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 ABHD1Q96SE0 405 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 GPHA2Q96T91 129 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 GINS4Q9BRT9 223 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 CHRDL1Q9BU40 450 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 SCRT1Q9BWW7 348 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
LINC01238-201ENST00000416204 SLC2A9Q9NRM0 540 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 MGAT4AQ9UM21 535 aa6.83□□□□□ -1.32
LINC01238-201ENST00000416204 IGLV11-55A0A075B6I3 123 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 IGLV2-18A0A075B6J9 118 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 TRBV6-7A0A0A0MS04 114 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 A0A0A6YYH2 397 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 LINC00854A0A1B0GVQ3 168 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 OR4C46A6NHA9 309 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 A6NJ64 397 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 GABARAPH6UMI1 98 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 SLC17A2O00624 439 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 CREBL2O60519 120 aaPredicted RBP6.82□□□□□ -1.32
LINC01238-201ENST00000416204 CCNKO75909 580 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 KBTBD11O94819 623 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 BPNT1O95861 308 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 FCGR3AP08637 254 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 HLA-DMBP28068 263 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 SSBP1Q04837 148 aaKnown RBP6.82□□□□□ -1.32
LINC01238-201ENST00000416204 RAB11BQ15907 218 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 HES5Q5TA89 166 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 LAMTOR1Q6IAA8 161 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 KCTD9Q7L273 389 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 ZNF502Q8TBZ5 544 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 TMEM190Q8WZ59 177 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 SLC25A38Q96DW6 304 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 URM1Q9BTM9 101 aaKnown RBP6.82□□□□□ -1.32
LINC01238-201ENST00000416204 CABLES2Q9BTV7 478 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 DIABLOQ9NR28 239 aa6.82□□□□□ -1.32
LINC01238-201ENST00000416204 IGHV3OR16-13A0A075B7E8 117 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 IGKV1D-8A0A087WSZ0 117 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 TRBV7-1A0A0A6YYK4 115 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 IGHV3-74A0A0B4J1X5 117 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 CGB1A6NKQ9 187 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 INMT-MINDY4F8WBC2 141 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 DHFRP00374 187 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 CRYGCP07315 174 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 ZNF735P0CB33 412 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
LINC01238-201ENST00000416204 RBMY1CP0DJD4 496 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 TCTAP57738 103 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 MRPS15P82914 257 aaKnown RBP6.81□□□□□ -1.32
LINC01238-201ENST00000416204 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
LINC01238-201ENST00000416204 FAM89BQ8N5H3 189 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 OR6F1Q8NGZ6 308 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 TCTEX1D2Q8WW35 142 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 FCAMRQ8WWV6 532 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 ADTRPQ96IZ2 230 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 OR2A7Q96R45 310 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 RNF2Q99496 336 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 ZNF436Q9C0F3 470 aaPredicted RBP6.81□□□□□ -1.32
LINC01238-201ENST00000416204 TAS2R8Q9NYW2 309 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 HSF4Q9ULV5 492 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 KCNK7Q9Y2U2 307 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 RBMX2Q9Y388 322 aaKnown RBP6.81□□□□□ -1.32
LINC01238-201ENST00000416204 BOLA1Q9Y3E2 137 aa6.81□□□□□ -1.32
LINC01238-201ENST00000416204 IGHV4-28A0A0C4DH34 117 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 SULT1C2O00338 296 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 TGOLN2O43493 480 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 SCGNO76038 276 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 GNB3P16520 340 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 NFYAP23511 347 aaPredicted RBP6.8□□□□□ -1.32
LINC01238-201ENST00000416204 KLF9Q13886 244 aaPredicted RBP6.8□□□□□ -1.32
LINC01238-201ENST00000416204 TMEM187Q14656 261 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 TMEM69Q5SWH9 247 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 LEMD1Q68G75 181 aa6.8□□□□□ -1.32
LINC01238-201ENST00000416204 H1FOOQ8IZA3 346 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms