RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 LY6EQ16553 131 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 BSXQ3C1V8 233 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 Q6YL49 198 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 RNASEH2CQ8TDP1 164 aaKnown RBP11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 SCARB1Q8WTV0 552 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 GNPNAT1Q96EK6 184 aaPredicted RBP11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 PARD6GQ9BYG4 376 aaPredicted RBP11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 WFDC1Q9HC57 220 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 UQCC1Q9NVA1 299 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 TMEM160Q9NX00 188 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 SOX21Q9Y651 276 aaPredicted RBP11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 CENPEQ02224 2701 aa11.33□□□□□ -0.6
HMGA1P1-201ENST00000415560 POLQO75417 2590 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 FNDC10F2Z333 226 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 SEC11BP0C7V7 166 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 DEFA4P12838 97 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 ARL16Q0P5N6 197 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 RBMS3Q6XE24 437 aaKnown RBP11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 HAPLN4Q86UW8 402 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 TMEM219Q86XT9 240 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 LRRC20Q8TCA0 184 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 CACNG8Q8WXS5 425 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 C22orf15Q8WYQ4 148 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 PRDM13Q9H4Q3 707 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
HMGA1P1-201ENST00000415560 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 FBLN7Q53RD9 439 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 ALKAL2Q6UX46 152 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 HSD17B11Q8NBQ5 300 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 OR1P1Q8NH06 330 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 P2RX4Q99571 388 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 ARV1Q9H2C2 271 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 PDZD2O15018 2839 aa11.31□□□□□ -0.6
HMGA1P1-201ENST00000415560 TNCP24821 2201 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 MDFIC2A0A1B0GVS7 189 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 A0A1B0GW64 132 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 SMCO3A2RU48 225 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 C17orf112F2Z3M2 114 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 MPDU1O75352 247 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 CFDP00746 253 aaPredicted RBP11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 REG1AP05451 166 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 FOSL1P15407 271 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 SSBP2P81877 361 aaPredicted RBP11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 RAB31Q13636 194 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 VWC2Q2TAL6 325 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 ZNF709Q8N972 641 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 F11RQ9Y624 299 aaKnown RBP11.3□□□□□ -0.6
HMGA1P1-201ENST00000415560 UBE2L5PA0A1B0GUS4 154 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 NPIPB5A8MRT5 1133 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 FBXO24O75426 580 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 IGHV4-59P01825 116 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 CRYGCP07315 174 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 AREGP15514 252 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 CTRB1P17538 263 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 CD69Q07108 199 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 KRTAP1-1Q07627 177 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 CTRB2Q6GPI1 263 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 FAM103A1Q9BTL3 118 aaKnown RBP11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 WDR61Q9GZS3 305 aaKnown RBP11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 SLC25A32Q9H2D1 315 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 PARP11Q9NR21 331 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 THYN1Q9P016 225 aa11.29□□□□□ -0.6
HMGA1P1-201ENST00000415560 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 SOX15O60248 233 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 APELAP0DMC3 54 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 SPP1P10451 314 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 CD99P14209 185 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 FGF7P21781 194 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 OPRK1P41145 380 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 RAB5CP51148 216 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 AKR1C1Q04828 323 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 UNQ5815/PRO19632Q6UWF5 114 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 TMEM86BQ8N661 226 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 OR2G3Q8NGZ4 309 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 TMED6Q8WW62 240 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 MISP3Q96FF7 219 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
HMGA1P1-201ENST00000415560 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms