RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZBTB34Q8NCN2 500 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 FAM216AQ8WUB2 273 aa12.56□□□□□ -0.4
SHMT2-202ENST00000414700 IGHV3OR16-10A0A075B7F0 116 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 ODF3BA8MYP8 253 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 EREGO14944 169 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 GZMBP10144 247 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 CEBPGP53567 150 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 PRRX1P54821 245 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 ICAM4Q14773 271 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF833PQ6ZTB9 187 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF664Q8N3J9 261 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 C7orf69Q9H7B7 122 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 GAB2Q9UQC2 676 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 SCAF4O95104 1147 aaKnown RBP12.55□□□□□ -0.4
SHMT2-202ENST00000414700 CT45A6P0DMU7 189 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 CT45A5P0DMU8 189 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 CT45A7P0DMV0 189 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 S100GP29377 79 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 RND2P52198 227 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF137PP52743 207 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 MSMO1Q15800 293 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 CYB561D1Q8N8Q1 229 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-202ENST00000414700 MRPL20Q9BYC9 149 aaKnown RBP12.55□□□□□ -0.4
SHMT2-202ENST00000414700 TMEM222Q9H0R3 208 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 CBY1Q9Y3M2 126 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 WSB1Q9Y6I7 421 aa12.55□□□□□ -0.4
SHMT2-202ENST00000414700 CENPVL3A0A0U1RRI6 287 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 H0Y980 276 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 S1PR3Q99500 378 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 HSD17B10Q99714 261 aaKnown RBP12.54□□□□□ -0.4
SHMT2-202ENST00000414700 TRAV40A0A0B4J280 105 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 LY6LH3BQJ8 138 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 UCP1P25874 307 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 DDB2Q92466 427 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 TMEM242Q9NWH2 141 aa12.54□□□□□ -0.4
SHMT2-202ENST00000414700 IGHV4-38-2P0DP08 117 aa12.53□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF816Q0VGE8 651 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-202ENST00000414700 ZNF266Q14584 549 aa12.53□□□□□ -0.4
SHMT2-202ENST00000414700 RUSC1-AS1Q66K80 236 aa12.53□□□□□ -0.4
SHMT2-202ENST00000414700 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
SHMT2-202ENST00000414700 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
SHMT2-202ENST00000414700 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
SHMT2-202ENST00000414700 LIN7CQ9NUP9 197 aaKnown RBP12.53□□□□□ -0.4
SHMT2-202ENST00000414700 HILPDAQ9Y5L2 63 aa12.53□□□□□ -0.4
SHMT2-202ENST00000414700 MARCH11A6NNE9 402 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 ST8SIA3O43173 380 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 FCGR3BO75015 233 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 DFFBO76075 338 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 CDS2O95674 445 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 GCGP01275 180 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 AMBPP02760 352 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 HTR1DP28221 377 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 UBE2E1P51965 193 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 CATR1Q13166 79 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 BRD3OSQ6XYD6 125 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 LYZL2Q7Z4W2 148 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 R3HDM4Q96D70 268 aa12.52□□□□□ -0.4
SHMT2-202ENST00000414700 RCL1Q9Y2P8 373 aaKnown RBP12.52□□□□□ -0.4
SHMT2-202ENST00000414700 TRBV24-1A0A075B6N3 115 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 CLDN34H7C241 214 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 ATP6V0CP27449 155 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 G0S2P27469 103 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.41
SHMT2-202ENST00000414700 SLC35G3Q8N808 338 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 AJUBAQ96IF1 538 aa12.52□□□□□ -0.41
SHMT2-202ENST00000414700 HIVEP1P15822 2718 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 RNF212BA8MTL3 300 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 PITX3O75364 302 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 MBP02144 154 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 SERPINE2P07093 398 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 GATA3P23771 443 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 SAA4P35542 130 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 PNRC1Q12796 327 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-202ENST00000414700 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-202ENST00000414700 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
SHMT2-202ENST00000414700 OR1P1Q8NH06 330 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 RPEQ96AT9 228 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 TMEM56Q96MV1 263 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 DPM3Q9P2X0 92 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 SOX21Q9Y651 276 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-202ENST00000414700 TMEM56-RWDD3S4R434 201 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 TNCP24821 2201 aa12.51□□□□□ -0.41
SHMT2-202ENST00000414700 S1PR2O95136 353 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 IL3RAP26951 378 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 IZUMO4Q1ZYL8 232 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 CYB5R2Q6BCY4 276 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 C18orf12Q96KH6 178 aa12.5□□□□□ -0.41
SHMT2-202ENST00000414700 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms