RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CST6Q15828 149 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ADIRFQ15847 76 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 FAM182AQ5T1J6 154 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 MRPL2Q5T653 305 aaKnown RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 C9orf153Q5TBE3 101 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF57Q68EA5 555 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 C22orf39Q6P5X5 142 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 CLEC20AQ6ZU45 233 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 AAED1Q7RTV5 226 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 VN1R4Q7Z5H5 301 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 C1orf174Q8IYL3 243 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 MAPKAPK5-AS1Q8N8E1 139 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 IGFBPL1Q8WX77 278 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 RAB37Q96AX2 223 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 TBL1YQ9BQ87 522 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 PAXXQ9BUH6 204 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 PLA2G2FQ9BZM2 168 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 COMMD5Q9GZQ3 224 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 SMDT1Q9H4I9 107 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 MARCOQ9UEW3 520 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-203ENST00000414174 RABAC1Q9UI14 185 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 ZNF222Q9UK12 451 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 PCTPQ9UKL6 214 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 V9GYH0 126 aa2.84□□□□□ -1.95
SF3B1-203ENST00000414174 TRPM3Q9HCF6 1732 aaPredicted RBP2.84□□□□□ -1.96
SF3B1-203ENST00000414174 ARHGAP5Q13017 1502 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 QRICH2Q9H0J4 1663 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 ARAP2Q8WZ64 1704 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 IGHV3OR16-9A0A0B4J2B5 98 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 C3orf85A0A1B0GTC6 90 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 TMEM235A6NFC5 223 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 NDUFC2-KCTD14E9PQ53 114 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 H0Y9J4 135 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 ANGPTL7O43827 346 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 TYROBPO43914 113 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 SS18L1O75177 396 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-203ENST00000414174 PITX3O75364 302 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 PROSCO94903 275 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 CD55P08174 381 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 FCGR3AP08637 254 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00869P0C866 280 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 PYYP10082 97 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 HLA-DOBP13765 273 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 BTCP35070 178 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 RPL22P35268 128 aaKnown RBP2.83□□□□□ -1.96
SF3B1-203ENST00000414174 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
SF3B1-203ENST00000414174 Q56UQ5 140 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 SPRNQ5BIV9 151 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 BVES-AS1Q5T3Y7 98 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 ATP1A1-AS1Q5TC04 95 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 STPG1Q5TH74 334 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 CLEC19AQ6UXS0 136 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 UNQ9165/PRO28630Q6UXU0 137 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 NOTCH2NLQ7Z3S9 236 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 C10orf126Q8N4M7 172 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 RFLNBQ8N5W9 214 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00311Q8N616 119 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 OR2T35Q8NGX2 323 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 VSTM2AQ8TAG5 236 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 OSR1Q8TAX0 266 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-203ENST00000414174 GNPNAT1Q96EK6 184 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF799Q96GE5 643 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 MCEEQ96PE7 176 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 MEIS3Q99687 375 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 SRXN1Q9BYN0 137 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 AGPAT4-IT1Q9H0P7 198 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 C16orf95Q9H693 158 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 MAP6D1Q9H9H5 199 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 PLAC1Q9HBJ0 212 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 DEPPQ9NTK1 212 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 TMEM242Q9NWH2 141 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 C19orf25Q9UFG5 118 aaPredicted RBP2.83□□□□□ -1.96
SF3B1-203ENST00000414174 AK3Q9UIJ7 227 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 RARRES3Q9UL19 164 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 ANAPC10Q9UM13 185 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 MYH1P12882 1939 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 ATG2AQ2TAZ0 1938 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 PXDNLA1KZ92 1463 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 ABCC6O95255 1503 aa2.83□□□□□ -1.96
SF3B1-203ENST00000414174 MADDQ8WXG6 1647 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 LTN1O94822 1766 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 TRBV24-1A0A075B6N3 115 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 TRAV12-2A0A075B6T6 113 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 IGKV1D-8A0A087WSZ0 117 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SMIM26A0A096LP01 95 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 IGLV1-36A0A0B4J1U3 117 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 PGPA6NDG6 321 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 TLCD2A6NGC4 264 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 UPK2O00526 184 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 FFAR1O14842 300 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 LYRM1O43325 122 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 NDUFS5O43920 106 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SRSF10O75494 262 aaKnown RBP2.82□□□□□ -1.96
SF3B1-203ENST00000414174 PMS2P2O95744 297 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 NGFP01138 241 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 TRGC2P03986 189 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SLC25A5P05141 298 aaKnown RBP2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SFTA3P0C7M3 94 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SDC2P34741 201 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms