RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 RGS21Q2M5E4 152 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 DEFB136Q30KP8 78 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 ZNF429Q86V71 674 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 ZNF491Q8N8L2 437 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 LRTM2Q8N967 370 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 MITD1Q8WV92 249 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 SLA2Q9H6Q3 261 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 GNB4Q9HAV0 340 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 HEYLQ9NQ87 328 aaPredicted RBP8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 ZFP57Q9NU63 452 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 GSKIPQ9P0R6 139 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 ZNF257Q9Y2Q1 563 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 S4R3C0 116 aa8.13□□□□□ -1.11
HLA-DMB-257ENST00000414017 ANKRD34BA5PLL1 514 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 MPTX1A8MV57 137 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 H3BUA1 57 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 SSNA1O43805 119 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 PRAF2O60831 178 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 TSPAN15O95858 294 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 IGHV3-23P01764 117 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 IL5P05113 134 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 IAPPP10997 89 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 CTRB1P17538 263 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 SNCAP37840 140 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 SPCS3P61009 180 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 ATP5G2Q06055 141 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 CTRB2Q6GPI1 263 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 C11orf87Q6NUJ2 197 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 HSD17B13Q7Z5P4 300 aaPredicted RBP8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 MISP3Q96FF7 219 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 SRSF8Q9BRL6 282 aaKnown RBP8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 MARVELD1Q9BSK0 173 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 RBKSQ9H477 322 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 FBXL7Q9UJT9 491 aa8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 PAIP2BQ9ULR5 123 aaKnown RBP8.12□□□□□ -1.11
HLA-DMB-257ENST00000414017 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 ADARB2-AS1A8MUL3 147 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 WRBO00258 174 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 GOSR2O14653 212 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 CYB5BO43169 146 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 NDUFB8O95169 186 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 CRYGCP07315 174 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 TNFRSF9Q07011 255 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 EXOSC2Q13868 293 aaKnown RBP8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 IAH1Q2TAA2 248 aaPredicted RBP8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR2C3Q8N628 320 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR4F17Q8NGA8 305 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 PINX1Q96BK5 328 aaKnown RBP8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR10C1Q96KK4 312 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR4F4Q96R69 305 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 P2RX4Q99571 388 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 HIPK2Q9H2X6 1198 aa8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 F11RQ9Y624 299 aaKnown RBP8.11□□□□□ -1.11
HLA-DMB-257ENST00000414017 CMYA5Q8N3K9 4069 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 FAM223BA6NKX1 122 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 SIX6O95475 246 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 HIST1H1BP16401 226 aaKnown RBP8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 CDX1P47902 265 aaPredicted RBP8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 TATDN3Q17R31 274 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 C15orf32Q32M92 178 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 FAM223AQ8IWN6 122 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 NECAP1Q8NC96 275 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR11H1Q8NG94 326 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR52E5Q8NH55 327 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 DTD1Q8TEA8 209 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 C4orf3Q8WVX3 66 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 DPF1Q92782 380 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 UBE2E2Q96LR5 201 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 ZC4H2Q9NQZ6 224 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 THYN1Q9P016 225 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 ALG5Q9Y673 324 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 TRRAPQ9Y4A5 3859 aa8.1□□□□□ -1.11
HLA-DMB-257ENST00000414017 IGLV11-55A0A075B6I3 123 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 MFSD2BA6NFX1 497 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 SNRPGP15A8MWD9 76 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 CCL24O00175 119 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 SSSCA1O60232 199 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 MED6O75586 246 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 IFNA10P01566 189 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 IGHV3-48P01763 117 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 LGALS1P09382 135 aaKnown RBP8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 SLC25A6P12236 298 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 NKX2-1P43699 371 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 SUB1P53999 127 aaKnown RBP eCLIP8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 MFAP2P55001 183 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 KIAA0141Q14154 515 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 GSG1LQ6UXU4 331 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 ZBTB8BQ8NAP8 495 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 UBAC2Q8NBM4 344 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR1N2Q8NGR9 330 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 OR1P1Q8NH06 330 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 MYOZ3Q8TDC0 251 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 EEF1AKMT3Q96AZ1 226 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 RAX2Q96IS3 184 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 HSPB7Q9UBY9 170 aa8.09□□□□□ -1.11
HLA-DMB-257ENST00000414017 LSM5Q9Y4Y9 91 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms