RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SDSLQ96GA7 329 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 REEP6Q96HR9 211 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 SPRR3Q9UBC9 169 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 MCTS1Q9ULC4 181 aaKnown RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 CACNA1CQ13936 2221 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 DUXBA0A1W2PPF3 345 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 MAP1LC3B2A6NCE7 125 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 TRIAP1O43715 76 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 HRASP01112 189 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 MDKP21741 143 aaPredicted RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 SRP14P37108 136 aaKnown RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 LHX2P50458 406 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 BIDP55957 195 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 SUMO2P61956 95 aaKnown RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 P2RY6Q15077 328 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 COL5A1-AS1Q5SY13 56 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 SAMD13Q5VXD3 122 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 Q71RC1 249 aaPredicted RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 RBMXL3Q8N7X1 1067 aaKnown RBP7.76□□□□□ -1.17
SNHG3-201ENST00000413987 TMEM178AQ8NBL3 297 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 SCCPDHQ8NBX0 429 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 OR2Z1Q8NG97 314 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 OR8B12Q8NGG6 310 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 MAP1LC3BQ9GZQ8 125 aa7.76□□□□□ -1.17
SNHG3-201ENST00000413987 CFAP46Q8IYW2 2715 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZFP92A6NM28 416 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 SRRM4A7MD48 611 aaKnown RBP7.75□□□□□ -1.17
SNHG3-201ENST00000413987 TNFSF13O75888 250 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 BRS3P32247 399 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 PHLDA2Q53GA4 152 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZFP30Q9Y2G7 519 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 POLR1DQ9Y2S0 133 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 RFNGQ9Y644 331 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 NBASA2RRP1 2371 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 USP24Q9UPU5 2620 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 TRAV17A0A0B4J275 112 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 PIGBOS1A0A0B4J2F0 54 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 IGKV1-9A0A0C4DH69 117 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 C3orf85A0A1B0GTC6 90 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF705FA8MVS1 300 aaPredicted RBP7.75□□□□□ -1.17
SNHG3-201ENST00000413987 TRAF3IP2O43734 574 aaPredicted RBP7.75□□□□□ -1.17
SNHG3-201ENST00000413987 SSSCA1O60232 199 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 HAND1O96004 215 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF705DP0CH99 300 aaPredicted RBP7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF705BP0CI00 300 aaPredicted RBP7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF121P58317 390 aaPredicted RBP7.75□□□□□ -1.17
SNHG3-201ENST00000413987 HERV-K104P61576 105 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 GRB2P62993 217 aaKnown RBP7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ADIRFQ15847 76 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 TCF24Q7RTU0 167 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 C6orf201Q7Z4U5 140 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF695Q8IW36 515 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZADH2Q8N4Q0 377 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 OR2T10Q8NGZ9 312 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 SCGB1C1Q8TD33 95 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 PP6455Q8WZ26 134 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 FAAP24Q9BTP7 215 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 OR51I2Q9H344 312 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 MAP1LC3AQ9H492 121 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 FUT9Q9Y231 359 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 ZFYVE26Q68DK2 2539 aa7.75□□□□□ -1.17
SNHG3-201ENST00000413987 IGSF10Q6WRI0 2623 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 PHF3Q92576 2039 aaKnown RBP7.74□□□□□ -1.17
SNHG3-201ENST00000413987 NKX2-6A6NCS4 301 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 PSPNO60542 156 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 IL6RP08887 468 aaPredicted RBP7.74□□□□□ -1.17
SNHG3-201ENST00000413987 CLDN17P56750 224 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 FXYD4P59646 89 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 RPL31P62899 125 aaKnown RBP7.74□□□□□ -1.17
SNHG3-201ENST00000413987 MPV17LQ2QL34 196 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 TBX15Q96SF7 602 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 SMIM7Q9BQ49 75 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 PSMG3Q9BT73 122 aaPredicted RBP7.74□□□□□ -1.17
SNHG3-201ENST00000413987 TMEM222Q9H0R3 208 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 ELL3Q9HB65 397 aaPredicted RBP7.74□□□□□ -1.17
SNHG3-201ENST00000413987 TRGV5A0A0B4J1U4 118 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 CEBPZOSA8MTT3 80 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 TMEM250H0YL14 139 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 C15orf65H3BRN8 121 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 MPPED1O15442 326 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 KBTBD11O94819 623 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 IGHV3-9P01782 118 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 IGHG3P01860 377 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 UBE2NP61088 152 aaKnown RBP7.74□□□□□ -1.17
SNHG3-201ENST00000413987 SERF2P84101 59 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 RUNX1Q01196 453 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF585BQ52M93 769 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 PRR30Q53SZ7 412 aaPredicted RBP7.74□□□□□ -1.17
SNHG3-201ENST00000413987 TSPO2Q5TGU0 170 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 C1QL2Q7Z5L3 287 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 TPRX1Q8N7U7 411 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 GATAD1Q8WUU5 269 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 ADTRPQ96IZ2 230 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 OR2J1Q9GZK6 312 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 LIME1Q9H400 295 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 ZDHHC11Q9H8X9 412 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 ZNF286AQ9HBT8 521 aa7.74□□□□□ -1.17
SNHG3-201ENST00000413987 FREM1Q5H8C1 2179 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms