RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 SPSB3Q6PJ21 355 aa12.62□□□□□ -0.39
COL6A2-205ENST00000413758 LINC00322Q6ZN03 302 aaPredicted RBP12.62□□□□□ -0.39
COL6A2-205ENST00000413758 CADM3Q8N126 398 aa12.62□□□□□ -0.39
COL6A2-205ENST00000413758 SCARB1Q8WTV0 552 aa12.62□□□□□ -0.39
COL6A2-205ENST00000413758 MRGPRFQ96AM1 343 aa12.62□□□□□ -0.39
COL6A2-205ENST00000413758 MISP3Q96FF7 219 aa12.62□□□□□ -0.39
COL6A2-205ENST00000413758 ZNF436Q9C0F3 470 aaPredicted RBP12.62□□□□□ -0.39
COL6A2-205ENST00000413758 FAM212BQ9NTI7 297 aaPredicted RBP12.62□□□□□ -0.39
COL6A2-205ENST00000413758 EXTL2Q9UBQ6 330 aa12.62□□□□□ -0.39
COL6A2-205ENST00000413758 IGHV3OR16-8A0A075B7F1 116 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 DBX1A6NMT0 343 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 OR52I2Q8NH67 350 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 SEC22AQ96IW7 307 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 TMEM14BQ9NUH8 114 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 KLK11Q9UBX7 282 aa12.61□□□□□ -0.39
COL6A2-205ENST00000413758 ZNF207O43670 478 aaKnown RBP12.6□□□□□ -0.39
COL6A2-205ENST00000413758 GABARAPO95166 117 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 SMIM18P0DKX4 95 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 PI3P19957 117 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 PPP5CP53041 499 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 CTF1Q16619 201 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 LAMTOR1Q6IAA8 161 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 CHRDL1Q9BU40 450 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
COL6A2-205ENST00000413758 RYR3Q15413 4870 aa12.6□□□□□ -0.39
COL6A2-205ENST00000413758 DNAH7Q8WXX0 4024 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 K7EIM0 57 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 NDUFA4O00483 81 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 RGS5O15539 181 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 IGKV1-39P01597 117 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 CD3DP04234 171 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 IGKV1D-39P04432 117 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 SCGB2B2Q4G0G5 96 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 OR1P1Q8NH06 330 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
COL6A2-205ENST00000413758 GAR1Q9NY12 217 aaKnown RBP12.59□□□□□ -0.39
COL6A2-205ENST00000413758 LOC102724200A0A096LPH7 203 aaPredicted RBP12.58□□□□□ -0.4
COL6A2-205ENST00000413758 NUPL2O15504 423 aaKnown RBP12.58□□□□□ -0.4
COL6A2-205ENST00000413758 YIF1AO95070 293 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 AKR1C2P52895 323 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 MFAP4P55083 255 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 PIGPP57054 158 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 HSPE1P61604 102 aaKnown RBP12.58□□□□□ -0.4
COL6A2-205ENST00000413758 ERHP84090 104 aaKnown RBP12.58□□□□□ -0.4
COL6A2-205ENST00000413758 SPINK9Q5DT21 86 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 GPR141Q7Z602 305 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 IL17DQ8TAD2 202 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 C15orf40Q8WUR7 153 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 PINX1Q96BK5 328 aaKnown RBP12.58□□□□□ -0.4
COL6A2-205ENST00000413758 ZNF486Q96H40 463 aaPredicted RBP12.58□□□□□ -0.4
COL6A2-205ENST00000413758 ATP6V0BQ99437 205 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 MRPS26Q9BYN8 205 aaKnown RBP12.58□□□□□ -0.4
COL6A2-205ENST00000413758 C5orf66Q9H5L9 145 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 COPZ2Q9P299 210 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 MTFP1Q9UDX5 166 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 UBQLN2Q9UHD9 624 aa12.58□□□□□ -0.4
COL6A2-205ENST00000413758 ATG12O94817 140 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 IGHV3-48P01763 117 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 TBPP20226 339 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 RND3P61587 244 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 PRCDQ00LT1 54 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-205ENST00000413758 IZUMO4Q1ZYL8 232 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 TRIM16LQ309B1 348 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 ARRDC1Q8N5I2 433 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 RNASE11Q8TAA1 199 aaKnown RBP12.57□□□□□ -0.4
COL6A2-205ENST00000413758 ZFAND1Q8TCF1 268 aa12.57□□□□□ -0.4
COL6A2-205ENST00000413758 SPAG8Q99932 426 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-205ENST00000413758 RAB3DO95716 219 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 MT-CO2P00403 227 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 IFNA17P01571 189 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 ADMP35318 185 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 SNCAP37840 140 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 TAS2R19P59542 299 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 CCDC71LQ8N9Z2 235 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 TP53RKQ96S44 253 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 ABHD1Q96SE0 405 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
COL6A2-205ENST00000413758 LCE6AA0A183 80 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 C3orf85A0A1B0GTC6 90 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 F8W735 103 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-205ENST00000413758 K7EMT4 169 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 TSPAN4O14817 238 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 GNG7O60262 68 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 CTSGP08311 255 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 SP6Q3SY56 376 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 LHFPL1Q86WI0 220 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 TMEM229BQ8NBD8 167 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 ENY2Q9NPA8 101 aa12.55□□□□□ -0.4
COL6A2-205ENST00000413758 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 C15orf62A8K5M9 175 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 I3L2K1 104 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 IGKV1-5P01602 117 aa12.54□□□□□ -0.4
COL6A2-205ENST00000413758 CTSDP07339 412 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms