RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ZNF497Q6ZNH5 498 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 DMRTC2Q8IXT2 367 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-211ENST00000413186 OR13A1Q8NGR1 328 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF418Q8TF45 676 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-211ENST00000413186 GFI1Q99684 422 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 MMP24Q9Y5R2 645 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 TRAPPC1Q9Y5R8 145 aa7.13□□□□□ -1.27
SYNE1-211ENST00000413186 TRAV24A0A0B4J272 114 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 LGALS7P47929 136 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 LCN2P80188 198 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SLC38A11Q08AI6 406 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SRSF7Q16629 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM155Q4W5P6 130 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF506Q5JVG8 444 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 GALNT14Q96FL9 552 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SLC35B3Q9H1N7 401 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 IL36RNQ9UBH0 155 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SMG1Q96Q15 3661 aaKnown RBP7.12□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF503-AS2A6NEH8 195 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 LYNX1G3V0Z9 82 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 CST7O76096 145 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 LYNX1P0DP58 116 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 REG1BP48304 166 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 ADORA2A-AS1P86434 159 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SMAGPQ0VAQ4 97 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 RSPO1Q2MKA7 263 aaPredicted RBP7.12□□□□□ -1.27
SYNE1-211ENST00000413186 MMD2Q8IY49 270 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 CLRN3Q8NCR9 226 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 MRGPRFQ96AM1 343 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SMIM7Q9BQ49 75 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SEC11CQ9BY50 192 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 FBXL15Q9H469 300 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 C5orf66Q9H5L9 145 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 HILPDAQ9Y5L2 63 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 OR2T8A6NH00 312 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 LDLRAD4O15165 306 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 TGFAP01135 160 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 RND3P61587 244 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 WDFY1Q8IWB7 410 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 PLPPR1Q8TBJ4 325 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 NEUROG1Q92886 237 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 RHOVQ96L33 236 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 PACRGQ96M98 296 aaPredicted RBP7.12□□□□□ -1.27
SYNE1-211ENST00000413186 FAM157AC9JC47 383 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 CD55P08174 381 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 OR4F17Q8NGA8 305 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 Q8TCH9 128 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 SRD5A3Q9H8P0 318 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 AUP1Q9Y679 476 aa7.12□□□□□ -1.27
SYNE1-211ENST00000413186 ANKRD11Q6UB99 2663 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 TRAV8-2A0A0B4J237 113 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 A0A1B0GV90 55 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 YPEL1O60688 119 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 LILRA1O75019 489 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 PITX3O75364 302 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 PGLYRP1O75594 196 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 AKR1C3P42330 323 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 PRSS8Q16651 343 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 LYZL2Q7Z4W2 148 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 ANKRD29Q8N6D5 301 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 OR52M1Q8NGK5 317 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 YPEL2Q96QA6 119 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 RARRES2Q99969 163 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 NAV3Q8IVL0 2385 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 CHD7Q9P2D1 2997 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 M0QZ24 198 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 H2BFSP57053 126 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 POLR2GP62487 172 aaKnown RBP eCLIP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 EWSR1Q01844 656 aaKnown RBP eCLIP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 PNRC1Q12796 327 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 ITLN2Q8WWU7 325 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 MEGF9Q9H1U4 602 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 RBKSQ9H477 322 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 C7orf69Q9H7B7 122 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 J3QR06 171 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 NMBP08949 121 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 ZNF660Q6AZW8 331 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 H1FOOQ8IZA3 346 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 OR1L6Q8NGR2 347 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 TMEM230Q96A57 120 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 TRIOO75962 3097 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 CHD9Q3L8U1 2897 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 TRBV6-7A0A0A0MS04 114 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 H3BP45 60 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 PRB1P04280 392 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 SFTA3P0C7M3 94 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 CFHR2P36980 270 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 SERF2P84101 59 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 SGMS2Q8NHU3 365 aa7.11□□□□□ -1.27
SYNE1-211ENST00000413186 LSM10Q969L4 123 aaKnown RBP7.11□□□□□ -1.27
SYNE1-211ENST00000413186 CORTO00230 105 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 CHST1O43916 411 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 IGLV3-1P01715 115 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 IER3P46695 156 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 BOD1L2Q8IYS8 172 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 DRAM1Q8N682 238 aa7.1□□□□□ -1.27
SYNE1-211ENST00000413186 OR11H4Q8NGC9 324 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms