RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 OR4A16Q8NH70 328 aa7.55□□□□□ -1.2
SOX9-AS1-201ENST00000412640 PSENENQ9NZ42 101 aa7.55□□□□□ -1.2
SOX9-AS1-201ENST00000412640 ZNF257Q9Y2Q1 563 aa7.55□□□□□ -1.2
SOX9-AS1-201ENST00000412640 FAM96BQ9Y3D0 163 aa7.55□□□□□ -1.2
SOX9-AS1-201ENST00000412640 AMMECR1Q9Y4X0 333 aaPredicted RBP7.55□□□□□ -1.2
SOX9-AS1-201ENST00000412640 KPTNQ9Y664 436 aa7.55□□□□□ -1.2
SOX9-AS1-201ENST00000412640 A0A1W2PRX2 142 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 SRRM4A7MD48 611 aaKnown RBP7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 ODF3BA8MYP8 253 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 DFFBO76075 338 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 NXPH3O95157 252 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 IGKV1-16P04430 117 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 ARG1P05089 322 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 SPP1P10451 314 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 IAPPP10997 89 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 RAB13P51153 203 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 DYNLT3P51808 116 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 OR4A47Q6IF82 309 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 TGIF2LXQ8IUE1 241 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 OR4P4Q8NGL7 312 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 OR4C13Q8NGP0 309 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 OR1S2Q8NGQ3 325 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 OR5C1Q8NGR4 320 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 OR4A5Q8NH83 315 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 OR2T6Q8NHC8 308 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 DTD1Q8TEA8 209 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 QTRT1Q9BXR0 403 aaKnown RBP7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 PARD6GQ9BYG4 376 aaPredicted RBP7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 PRNDQ9UKY0 176 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 WASHC3Q9Y3C0 194 aa7.54□□□□□ -1.2
SOX9-AS1-201ENST00000412640 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 TRAV3A0A0B4J244 114 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 PMS2P5A8MQ11 134 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 LEUTXA8MZ59 168 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 UPK2O00526 184 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 VDAC2P45880 294 aaPredicted RBP7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 LGALS7P47929 136 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 SULT1A2P50226 295 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 HSPE1P61604 102 aaKnown RBP7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 HBG1P69891 147 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 HBG2P69892 147 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 DIAPH2-AS1Q14236 149 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 HCP5Q6MZN7 132 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 SSX9Q7RTT3 188 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 HAPLN4Q86UW8 402 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 VKORC1L1Q8N0U8 176 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 EIF4E3Q8N5X7 224 aaKnown RBP7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 TMED6Q8WW62 240 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 FLYWCH2Q96CP2 140 aaKnown RBP7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 SAT2Q96F10 170 aaPredicted RBP7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 ATP5SQ99766 215 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 RNF5Q99942 180 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 SMIM3Q9BZL3 60 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 SIRPDQ9H106 197 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 FKBP11Q9NYL4 201 aa7.53□□□□□ -1.2
SOX9-AS1-201ENST00000412640 STARD9Q9P2P6 4700 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 INS-IGF2F8WCM5 200 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 SHOXO15266 292 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 CST7O76096 145 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 KBTBD11O94819 623 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 IGLV2-23P01705 113 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 SAA1P0DJI8 122 aaPredicted RBP7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 RAB5CP51148 216 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 OR2B8PP59922 312 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 ARF6P62330 175 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 RPP30P78346 268 aaKnown RBP7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 HABP2Q14520 560 aaPredicted RBP7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 ATP6V1FQ16864 119 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 SPANXN5Q5MJ07 72 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 FAM74A1Q5RGS3 127 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 PNKDQ8N490 385 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 VSTM2AQ8TAG5 236 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 TMEM167AQ8TBQ9 72 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 GNPNAT1Q96EK6 184 aaPredicted RBP7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 RCHY1Q96PM5 261 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 OR4C12Q96R67 309 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 TSNAXQ99598 290 aaKnown RBP7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 DPM3Q9P2X0 92 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 TCF19Q9Y242 345 aa7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 STRAPQ9Y3F4 350 aaKnown RBP7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 HUWE1Q7Z6Z7 4374 aaKnown RBP7.52□□□□□ -1.21
SOX9-AS1-201ENST00000412640 IGHV1-3A0A0C4DH29 117 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 MFSD2BA6NFX1 497 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 C15orf62A8K5M9 175 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 CEBPZOSA8MTT3 80 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 NUDT19A8MXV4 375 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 OOSP1A8MZH6 123 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 H3BP45 60 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 H7C2Y5 167 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 RBMXL2O75526 392 aaKnown RBP7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 IFNA17P01571 189 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 PF4P02776 101 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 FBP1P09467 338 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 METTL15P1P0C7V9 234 aa7.51□□□□□ -1.21
SOX9-AS1-201ENST00000412640 PF4V1P10720 104 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms