RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 IGHV3OR16-13A0A075B7E8 117 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 IGHV3-74A0A0B4J1X5 117 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 CA2P00918 260 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 OR5AL1P0C617 328 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 CCL20P78556 96 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 C10orf113Q5VZT2 155 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 OR4A47Q6IF82 309 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 WDR61Q9GZS3 305 aaKnown RBP9.31□□□□□ -0.92
PTPRF-204ENST00000412568 ZNRD1Q9P1U0 126 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 ALPK3Q96L96 1907 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 MC5RP33032 325 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 HERPUD1Q15011 391 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 COLCA1Q6ZS62 124 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 PRSS3P2Q8NHM4 247 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 PERPQ96FX8 193 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 IGKV3-15P01624 115 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 LIPFP07098 398 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 DLX1P56177 255 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 ZNF146Q15072 292 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 ELOBQ15370 118 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 PDPNQ86YL7 162 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 LRTM2Q8N967 370 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 OR4D5Q8NGN0 318 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 LIME1Q9H400 295 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 EML6Q6ZMW3 1958 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 TNFSF13O75888 250 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 MOSP00540 346 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 COL5A1-AS1Q5SY13 56 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 SSX8Q7RTT4 187 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
PTPRF-204ENST00000412568 S100A7P31151 101 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 PCP4P48539 62 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 WDR73Q6P4I2 378 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 COQ2Q96H96 371 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 C1RLQ9NZP8 487 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 RRHO14718 337 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 ATG101Q9BSB4 218 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 NAGKQ9UJ70 344 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 YTHDF2Q9Y5A9 579 aaKnown RBP9.3□□□□□ -0.92
PTPRF-204ENST00000412568 SIAH2O43255 324 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 CXorf1O96002 111 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 SRSF4Q08170 494 aaKnown RBP9.3□□□□□ -0.92
PTPRF-204ENST00000412568 Q6ZR03 302 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 REC114Q7Z4M0 266 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 KIAA1549LQ6ZVL6 1849 aa9.3□□□□□ -0.92
PTPRF-204ENST00000412568 SETD2Q9BYW2 2564 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-204ENST00000412568 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 IGKV1-6A0A0C4DH72 117 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 NAV2Q8IVL1 2488 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 NHLRC2Q8NBF2 726 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 TMEM167BQ9NRX6 74 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 IGHV3-23P01764 117 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 C10orf55Q5SWW7 151 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 Q6P435 159 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 WDR86Q86TI4 376 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 ZNF525Q8N782 197 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 FAM215AQ9Y5M1 114 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 IGKV1D-17A0A075B6S4 117 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 HELTA6NFD8 242 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 OR2J3O76001 311 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 SRP19P09132 144 aaKnown RBP9.29□□□□□ -0.92
PTPRF-204ENST00000412568 MYOD1P15172 320 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
PTPRF-204ENST00000412568 LRRC75BQ2VPJ9 315 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
PTPRF-204ENST00000412568 TMEM186Q96B77 213 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 DMRTA2Q96SC8 542 aa9.29□□□□□ -0.92
PTPRF-204ENST00000412568 A0A0G2JRQ6 117 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 K7ENP7 123 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 PDE6DO43924 150 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 ARL14EPLP0DKL9 152 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 MSRB2Q9Y3D2 182 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 GNLYP22749 145 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 SRP14P37108 136 aaKnown RBP9.28□□□□□ -0.92
PTPRF-204ENST00000412568 ADIPOQQ15848 244 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 KIAA1644Q3SXP7 199 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 CCDC144NLQ6NUI1 221 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 OR2D3Q8NGH3 330 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 GSX1Q9H4S2 264 aaPredicted RBP9.28□□□□□ -0.92
PTPRF-204ENST00000412568 GRIFINA4D1Z8 144 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 C1QTNF9BB2RNN3 333 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 GCGP01275 180 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 SOD3P08294 240 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 OR9G9P0C7N8 305 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 C1QTNF9P0C862 333 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 DUTP33316 252 aaKnown RBP9.28□□□□□ -0.92
PTPRF-204ENST00000412568 MFAP2P55001 183 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 ZNF506Q5JVG8 444 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 ASCL4Q6XD76 172 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 PSMG3Q9BT73 122 aaPredicted RBP9.28□□□□□ -0.92
PTPRF-204ENST00000412568 TMEM191AQ9H0A3 160 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 WNK1Q9H4A3 2382 aa9.28□□□□□ -0.92
PTPRF-204ENST00000412568 USP9YO00507 2555 aaPredicted RBP9.28□□□□□ -0.92
PTPRF-204ENST00000412568 IGHV3-49A0A0A0MS15 119 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.92
PTPRF-204ENST00000412568 MPDU1O75352 247 aa9.27□□□□□ -0.92
PTPRF-204ENST00000412568 COX6B1P14854 86 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms