RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 DAZ1Q9NQZ3 744 aaKnown RBP16.7■□□□□ 0.26
MSH6-202ENST00000411819 LYSTQ99698 3801 aa16.7■□□□□ 0.26
MSH6-202ENST00000411819 DBX1A6NMT0 343 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 FAM25AB3EWG3 89 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 FAM25CB3EWG5 89 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 FAM25GB3EWG6 89 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 SPSB3Q6PJ21 355 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 CADM3Q8N126 398 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 IL17DQ8TAD2 202 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 SCARB1Q8WTV0 552 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 CHRDL1Q9BU40 450 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 TMEM14BQ9NUH8 114 aa16.69■□□□□ 0.26
MSH6-202ENST00000411819 IGHV3OR16-8A0A075B7F1 116 aa16.68■□□□□ 0.26
MSH6-202ENST00000411819 LOC102724200A0A096LPH7 203 aaPredicted RBP16.68■□□□□ 0.26
MSH6-202ENST00000411819 H2BFWTQ7Z2G1 175 aa16.68■□□□□ 0.26
MSH6-202ENST00000411819 SLC38A6Q8IZM9 456 aa16.68■□□□□ 0.26
MSH6-202ENST00000411819 K7EIM0 57 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 M0QYG6 137 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 NDUFA4O00483 81 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 RORCP51449 518 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 OR2C3Q8N628 320 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 OR4A16Q8NH70 328 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 MRGPRFQ96AM1 343 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 MISP3Q96FF7 219 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 SPAG8Q99932 426 aaPredicted RBP16.67■□□□□ 0.26
MSH6-202ENST00000411819 C5orf66Q9H5L9 145 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 FAM212BQ9NTI7 297 aaPredicted RBP16.67■□□□□ 0.26
MSH6-202ENST00000411819 UBQLN2Q9UHD9 624 aa16.67■□□□□ 0.26
MSH6-202ENST00000411819 ZNF207O43670 478 aaKnown RBP16.66■□□□□ 0.26
MSH6-202ENST00000411819 MZT2AQ6P582 158 aa16.66■□□□□ 0.26
MSH6-202ENST00000411819 OR1P1Q8NH06 330 aa16.66■□□□□ 0.26
MSH6-202ENST00000411819 SEC22AQ96IW7 307 aa16.66■□□□□ 0.26
MSH6-202ENST00000411819 ATP6V0BQ99437 205 aa16.66■□□□□ 0.26
MSH6-202ENST00000411819 F8W735 103 aaPredicted RBP16.65■□□□□ 0.26
MSH6-202ENST00000411819 IGKV1-39P01597 117 aa16.65■□□□□ 0.26
MSH6-202ENST00000411819 IGKV1D-39P04432 117 aa16.65■□□□□ 0.26
MSH6-202ENST00000411819 PGAM2P15259 253 aa16.65■□□□□ 0.26
MSH6-202ENST00000411819 ADMP35318 185 aa16.65■□□□□ 0.26
MSH6-202ENST00000411819 UCP3P55916 312 aa16.65■□□□□ 0.26
MSH6-202ENST00000411819 LAMTOR1Q6IAA8 161 aa16.65■□□□□ 0.26
MSH6-202ENST00000411819 TSPAN4O14817 238 aa16.64■□□□□ 0.25
MSH6-202ENST00000411819 RNASE10Q5GAN6 216 aaKnown RBP16.64■□□□□ 0.25
MSH6-202ENST00000411819 AP3S1Q92572 193 aa16.64■□□□□ 0.25
MSH6-202ENST00000411819 NUPL2O15504 423 aaKnown RBP16.63■□□□□ 0.25
MSH6-202ENST00000411819 JTBO76095 146 aa16.63■□□□□ 0.25
MSH6-202ENST00000411819 PRCDQ00LT1 54 aa16.63■□□□□ 0.25
MSH6-202ENST00000411819 NAA50Q9GZZ1 169 aaKnown RBP16.63■□□□□ 0.25
MSH6-202ENST00000411819 DNAH1Q9P2D7 4330 aa16.62■□□□□ 0.25
MSH6-202ENST00000411819 OR4C46A6NHA9 309 aa16.62■□□□□ 0.25
MSH6-202ENST00000411819 YIF1AO95070 293 aa16.62■□□□□ 0.25
MSH6-202ENST00000411819 PI3P19957 117 aa16.62■□□□□ 0.25
MSH6-202ENST00000411819 RELQ04864 619 aaPredicted RBP16.62■□□□□ 0.25
MSH6-202ENST00000411819 PINX1Q96BK5 328 aaKnown RBP16.62■□□□□ 0.25
MSH6-202ENST00000411819 OVOL2Q9BRP0 275 aa16.62■□□□□ 0.25
MSH6-202ENST00000411819 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
MSH6-202ENST00000411819 KLK11Q9UBX7 282 aa16.62■□□□□ 0.25
MSH6-202ENST00000411819 K7EMT4 169 aa16.61■□□□□ 0.25
MSH6-202ENST00000411819 CTSGP08311 255 aa16.61■□□□□ 0.25
MSH6-202ENST00000411819 AKR1C2P52895 323 aa16.61■□□□□ 0.25
MSH6-202ENST00000411819 APOC4P55056 127 aa16.61■□□□□ 0.25
MSH6-202ENST00000411819 MFAP4P55083 255 aa16.61■□□□□ 0.25
MSH6-202ENST00000411819 SPINK9Q5DT21 86 aa16.61■□□□□ 0.25
MSH6-202ENST00000411819 OR52I2Q8NH67 350 aa16.61■□□□□ 0.25
MSH6-202ENST00000411819 C15orf62A8K5M9 175 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 I3L2K1 104 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 GABARAPO95166 117 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 MT-CO2P00403 227 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 IGHV3-48P01763 117 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 CD3DP04234 171 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 CTSDP07339 412 aaPredicted RBP16.6■□□□□ 0.25
MSH6-202ENST00000411819 PPP5CP53041 499 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 PIGPP57054 158 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 HSPE1P61604 102 aaKnown RBP16.6■□□□□ 0.25
MSH6-202ENST00000411819 IZUMO4Q1ZYL8 232 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 ODF3L2Q3SX64 289 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 ZNF114Q8NC26 417 aa16.6■□□□□ 0.25
MSH6-202ENST00000411819 ZNF486Q96H40 463 aaPredicted RBP16.6■□□□□ 0.25
MSH6-202ENST00000411819 GNG7O60262 68 aa16.59■□□□□ 0.25
MSH6-202ENST00000411819 ZNF182P17025 639 aaPredicted RBP16.59■□□□□ 0.25
MSH6-202ENST00000411819 RND3P61587 244 aa16.59■□□□□ 0.25
MSH6-202ENST00000411819 ERHP84090 104 aaKnown RBP16.59■□□□□ 0.25
MSH6-202ENST00000411819 CTF1Q16619 201 aa16.59■□□□□ 0.25
MSH6-202ENST00000411819 GPR107Q5VW38 600 aa16.59■□□□□ 0.25
MSH6-202ENST00000411819 ARRDC1Q8N5I2 433 aa16.59■□□□□ 0.25
MSH6-202ENST00000411819 IGHV3-49A0A0A0MS15 119 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 IGHV7-4-1A0A0J9YVY3 117 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 SMIM18P0DKX4 95 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 DEFB135Q30KP9 77 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 LHFPL1Q86WI0 220 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 SLC35G3Q8N808 338 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 TP53RKQ96S44 253 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 RNF2Q99496 336 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 TXN2Q99757 166 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 RHPN1-AS1Q9BWJ2 59 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 SMPXQ9UHP9 88 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 HYDINQ4G0P3 5121 aa16.58■□□□□ 0.24
MSH6-202ENST00000411819 IGKV3-7A0A075B6H7 116 aa16.57■□□□□ 0.24
MSH6-202ENST00000411819 TBPP20226 339 aa16.57■□□□□ 0.24
MSH6-202ENST00000411819 FCGR2BP31994 310 aaPredicted RBP16.57■□□□□ 0.24
MSH6-202ENST00000411819 TRIM16LQ309B1 348 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms