RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
NEDD1-202ENST00000411739 CACNG5Q9UF02 275 aa9.19□□□□□ -0.94
NEDD1-202ENST00000411739 WIPF1O43516 503 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 SAP30O75446 220 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 ATG12O94817 140 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 PRCDQ00LT1 54 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 PPP1R1AQ13522 171 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 ANKRD55Q3KP44 614 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 GALNT14Q96FL9 552 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 SLC25A21Q9BQT8 299 aaPredicted RBP9.18□□□□□ -0.94
NEDD1-202ENST00000411739 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 TMEM56-RWDD3S4R434 201 aa9.18□□□□□ -0.94
NEDD1-202ENST00000411739 IGHV3-35A0A0C4DH35 117 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 OR2C1O95371 312 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 RBMS2Q15434 407 aaKnown RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 RPEL1Q2QD12 228 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 MCRIP2Q9BUT9 160 aaKnown RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 PLEKHA3Q9HB20 300 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 AURKAIP1Q9NWT8 199 aaPredicted RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 F11RQ9Y624 299 aaKnown RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 B3GALNT1O75752 331 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 DUS4LO95620 317 aaKnown RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 FGF2P09038 288 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 ANXA7P20073 488 aaKnown RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 TMEM128Q5BJH2 165 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 CENPSQ8N2Z9 138 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 MISP3Q96FF7 219 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 SRSF8Q9BRL6 282 aaKnown RBP9.17□□□□□ -0.94
NEDD1-202ENST00000411739 PTTG2Q9NZH5 202 aa9.17□□□□□ -0.94
NEDD1-202ENST00000411739 NAP1L6A6NFF2 107 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 NDUFB6O95139 128 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 CLEC3BP05452 202 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 HIST1H1BP16401 226 aaKnown RBP9.16□□□□□ -0.94
NEDD1-202ENST00000411739 EDN2P20800 178 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 KLF5Q13887 457 aaPredicted RBP9.16□□□□□ -0.94
NEDD1-202ENST00000411739 C9orf66Q5T8R8 295 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 ZNF429Q86V71 674 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 OR2C3Q8N628 320 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 EEF1AKMT3Q96AZ1 226 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 BATF3Q9NR55 127 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 WI2-2373I1.2A0A1W2PRP0 233 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 CENPXA8MT69 81 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 LYRM1O43325 122 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 ZP3P21754 424 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 GPR183P32249 361 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
NEDD1-202ENST00000411739 THOC7Q6I9Y2 204 aaKnown RBP9.16□□□□□ -0.94
NEDD1-202ENST00000411739 UBAC2Q8NBM4 344 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 DEDD2Q8WXF8 326 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 PINX1Q96BK5 328 aaKnown RBP9.16□□□□□ -0.94
NEDD1-202ENST00000411739 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.16□□□□□ -0.94
NEDD1-202ENST00000411739 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
NEDD1-202ENST00000411739 SFT2D2O95562 160 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 ANXA3P12429 323 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 ARL3P36405 182 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 HSD17B13Q7Z5P4 300 aaPredicted RBP9.15□□□□□ -0.94
NEDD1-202ENST00000411739 LGI3Q8N145 548 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 PRKDCP78527 4128 aaKnown RBP9.15□□□□□ -0.94
NEDD1-202ENST00000411739 ERHP84090 104 aaKnown RBP9.15□□□□□ -0.94
NEDD1-202ENST00000411739 ACSM6Q6P461 480 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 ZNF502Q8TBZ5 544 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 SCARB1Q8WTV0 552 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 PRR25Q96S07 402 aa9.15□□□□□ -0.94
NEDD1-202ENST00000411739 OR2T8A6NH00 312 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 K7EIM0 57 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 HOXB5P09067 269 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 EGFEM1PQ0D2K5 195 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 KLK9Q2XQG4 91 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 PDLIM3Q53GG5 364 aaPredicted RBP9.14□□□□□ -0.95
NEDD1-202ENST00000411739 FAM219AQ8IW50 185 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 OR1P1Q8NH06 330 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 S100ZQ8WXG8 99 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 THYN1Q9P016 225 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 KLK9Q9UKQ9 250 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 TRAV6A0A075B6T7 132 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 A0A0B4J2A0 478 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 CEBPZOSA8MTT3 80 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 SNCAP37840 140 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 UBE2MP61081 183 aaKnown RBP9.14□□□□□ -0.95
NEDD1-202ENST00000411739 MLANAQ16655 118 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 NMSQ5H8A3 153 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 IL34Q6ZMJ4 242 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 OR52B4Q8NGK2 314 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 OR9G4Q8NGQ1 327 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 MRAPQ8TCY5 172 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 IL22RA2Q969J5 263 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 CXorf58Q96LI9 332 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 OR4C12Q96R67 309 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 C7orf50Q9BRJ6 194 aaKnown RBP9.14□□□□□ -0.95
NEDD1-202ENST00000411739 CCDC32Q9BV29 185 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 ENY2Q9NPA8 101 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 SHPKQ9UHJ6 478 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 TBC1D24Q9ULP9 559 aa9.14□□□□□ -0.95
NEDD1-202ENST00000411739 IGHV3OR16-8A0A075B7F1 116 aa9.13□□□□□ -0.95
NEDD1-202ENST00000411739 ZNF320A2RRD8 509 aa9.13□□□□□ -0.95
NEDD1-202ENST00000411739 C9orf170A2RU37 121 aa9.13□□□□□ -0.95
NEDD1-202ENST00000411739 K7EIL1 84 aa9.13□□□□□ -0.95
NEDD1-202ENST00000411739 GGCTO75223 188 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms