RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 IGHV3-66A0A0C4DH42 116 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 LOC100130705A0A1B0GUX0 176 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF705FA8MVS1 300 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM229AH3BQW9 127 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 K7EQG2 157 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 UPK2O00526 184 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 SLC17A2O00624 439 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 MYL12BO14950 172 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 RBFOX2O43251 390 aaKnown RBP eCLIP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 DENRO43583 198 aaKnown RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 GNG7O60262 68 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 WBP4O75554 376 aaKnown RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 HPRT1P00492 218 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGLV2-14P01704 120 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 HLA-DQB1P01920 261 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 HBE1P02100 147 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 APOHP02749 345 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF688P0C7X2 276 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF705DP0CH99 300 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF705BP0CI00 300 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 CD37P11049 281 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 NQO2P16083 231 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 NFYAP23511 347 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 NPPCP23582 126 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 GADD45AP24522 165 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 GNRHRP30968 328 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 NPBWR1P48145 328 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 HOXA1P49639 335 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 EIF2B2P49770 351 aaKnown RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 AP2S1P53680 142 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 XGP55808 180 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 WNT4P56705 351 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 BRWD1-AS2P59051 145 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 TAS2R31P59538 309 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ERVK-16P61578 105 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 WT1-ASQ06250 92 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ST3GAL4Q11206 333 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 CATR1Q13166 79 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 INSL4Q14641 139 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ARL6IP1Q15041 203 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 P2RY14Q15391 338 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 RAB11BQ15907 218 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 POU2AF1Q16633 256 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 SMN1Q16637 294 aaKnown RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 C2orf76Q3KRA6 126 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 KCTD21Q4G0X4 260 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 HSD17B12Q53GQ0 312 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 PSMG4Q5JS54 123 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM222AQ5U5X8 452 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 C1orf146Q5VVC0 180 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM88Q6PEY1 159 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF773Q6PK81 442 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 TOMM20LQ6UXN7 152 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF705AQ6ZN79 300 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q6ZS49 121 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 SPAG16Q8N0X2 631 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 LILRB2Q8N423 598 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 CBR4Q8N4T8 237 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM24BQ8N5W8 94 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZBTB34Q8NCN2 500 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 CCDC197Q8NCU1 140 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 DMBX1Q8NFW5 382 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR10W1Q8NGF6 305 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR1P1Q8NH06 330 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNRF2Q8NHG8 242 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 APH1BQ8WW43 257 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 MAFIPQ8WZ33 124 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ST8SIA2Q92186 375 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 SLC25A46Q96AG3 418 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM3DQ96BQ1 224 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 MOB3AQ96BX8 217 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 SLC7A6OSQ96CW6 309 aaPredicted RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF503Q96F45 646 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 MISP3Q96FF7 219 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM80Q96HE8 168 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 NARS2Q96I59 477 aaKnown RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM56Q96MV1 263 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 RAB40CQ96S21 281 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 HINT2Q9BX68 163 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 NXF2Q9GZY0 626 aaKnown RBP1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 DCSTAMPQ9H295 470 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 KCNK15Q9H427 330 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q9H8V8 135 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 PLEKHA2Q9HB19 425 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM140Q9NV12 185 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF446Q9NWS9 450 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 FKBP11Q9NYL4 201 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 MDFICQ9P1T7 246 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 DKK2Q9UBU2 259 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 RAB22AQ9UL26 194 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 KCNK7Q9Y2U2 307 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 RFNGQ9Y644 331 aa1.67□□□□□ -2.14
RNU4-53P-201ENST00000410828 A0A075B6Q4 140 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGKV1D-8A0A087WSZ0 117 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGKV1D-13A0A0B4J2D9 117 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 TEX50A0A1B0GTY4 177 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 LOC102723971A0A1B0GUV8 181 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 A0A1W2PPQ1 181 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 RPS10-NUDT3A0A1W2PQS6 291 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 METTL21EPA6NDL7 271 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms