RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SELENOHQ8IZQ5 122 aaKnown RBP8.41□□□□□ -1.06
CHMP3-205ENST00000409810 LGI3Q8N145 548 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 CENPSQ8N2Z9 138 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 SLC35G3Q8N808 338 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 OR10W1Q8NGF6 305 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 DCUN1D4Q92564 292 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 ENY2Q9NPA8 101 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 KLK9Q9UKQ9 250 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 TMEM56-RWDD3S4R434 201 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 SORL1Q92673 2214 aa8.41□□□□□ -1.06
CHMP3-205ENST00000409810 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.4□□□□□ -1.06
CHMP3-205ENST00000409810 TRBV7-1A0A0A6YYK4 115 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 DBX1A6NMT0 343 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 UBE2MP61081 183 aaKnown RBP8.4□□□□□ -1.06
CHMP3-205ENST00000409810 WT1-ASQ06250 92 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 TMEM187Q14656 261 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 SLC25A24Q6NUK1 477 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 C19orf35Q6ZS72 473 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 OR1P1Q8NH06 330 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 LHFPL5Q8TAF8 219 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 DLX4Q92988 240 aaPredicted RBP8.4□□□□□ -1.06
CHMP3-205ENST00000409810 ELOVL1Q9BW60 279 aa8.4□□□□□ -1.06
CHMP3-205ENST00000409810 WDR12Q9GZL7 423 aaKnown RBP8.4□□□□□ -1.06
CHMP3-205ENST00000409810 F11RQ9Y624 299 aaKnown RBP8.4□□□□□ -1.06
CHMP3-205ENST00000409810 A0A0B4J293 547 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 A0A0B4J2A0 478 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 LINC00854A0A1B0GVQ3 168 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 ST8SIA3O43173 380 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 WIPF1O43516 503 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 NDUFB6O95139 128 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 VAMP1P23763 118 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 HOXA1P49639 335 aaPredicted RBP8.39□□□□□ -1.07
CHMP3-205ENST00000409810 CCR6P51684 374 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 IZUMO4Q1ZYL8 232 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 OR2C3Q8N628 320 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 ZNF114Q8NC26 417 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 VN1R17PQ8TDU5 208 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.39□□□□□ -1.07
CHMP3-205ENST00000409810 SHPKQ9UHJ6 478 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 DNAH3Q8TD57 4116 aa8.39□□□□□ -1.07
CHMP3-205ENST00000409810 A0A0G2JRQ6 117 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 INS-IGF2F8WCM5 200 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 LYRM1O43325 122 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 GGCTO75223 188 aaKnown RBP8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SAP30O75446 220 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 NDUFB8O95169 186 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SFT2D2O95562 160 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 TRBV12-3P01733 135 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SULT1A3P0DMM9 295 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SULT1A4P0DMN0 295 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SNCAP37840 140 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SUB1P53999 127 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SPCS3P61009 180 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 SUPT4H1P63272 117 aaKnown RBP8.38□□□□□ -1.07
CHMP3-205ENST00000409810 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 ZNF846Q147U1 533 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 OR52E5Q8NH55 327 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 GPR146Q96CH1 333 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 OR4C12Q96R67 309 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 ATP6V0BQ99437 205 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 PEMTQ9UBM1 199 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
CHMP3-205ENST00000409810 MFSD2BA6NFX1 497 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 CORTO00230 105 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 BMPR1BO00238 502 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 IGHV3-23P01764 117 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 ARL3P36405 182 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 PPP1R1AQ13522 171 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 KLF5Q13887 457 aaPredicted RBP8.37□□□□□ -1.07
CHMP3-205ENST00000409810 AARDQ4LEZ3 155 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 SPINK9Q5DT21 86 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 ACSM6Q6P461 480 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 OR9G4Q8NGQ1 327 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 CCDC140Q96MF4 163 aa8.37□□□□□ -1.07
CHMP3-205ENST00000409810 GAR1Q9NY12 217 aaKnown RBP8.37□□□□□ -1.07
CHMP3-205ENST00000409810 PPP5D1E7EU14 171 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 HLA-AP01891 365 aaKnown RBP8.36□□□□□ -1.07
CHMP3-205ENST00000409810 BTCP35070 178 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 SYNJ2BPP57105 145 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 DCTN2Q13561 401 aaKnown RBP8.36□□□□□ -1.07
CHMP3-205ENST00000409810 SMCO1Q147U7 214 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 PDLIM3Q53GG5 364 aaPredicted RBP8.36□□□□□ -1.07
CHMP3-205ENST00000409810 NMSQ5H8A3 153 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 MZT2BQ6NZ67 158 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 Q6ZRM9 215 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 LRTM2Q8N967 370 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 ZNF502Q8TBZ5 544 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 AURKAIP1Q9NWT8 199 aaPredicted RBP8.36□□□□□ -1.07
CHMP3-205ENST00000409810 C21orf62Q9NYP8 219 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 PRR13Q9NZ81 148 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 TMED3Q9Y3Q3 217 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 DMRT1Q9Y5R6 373 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 S4R3C0 116 aa8.36□□□□□ -1.07
CHMP3-205ENST00000409810 A0A1B0GU03 582 aa8.35□□□□□ -1.07
CHMP3-205ENST00000409810 CEBPZOSA8MTT3 80 aa8.35□□□□□ -1.07
CHMP3-205ENST00000409810 PLA2G10O15496 165 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms