RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GINS3Q9BRX5 216 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 RSG1Q9BU20 258 aa9.91□□□□□ -0.82
CHMP3-204ENST00000409727 ITPR2Q14571 2701 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 H3BUX3 64 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 RNASE2P10153 161 aaKnown RBP9.9□□□□□ -0.82
CHMP3-204ENST00000409727 ATP6V0CP27449 155 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 Q8N9W7 124 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 RASL11BQ9BPW5 248 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 TMEM147Q9BVK8 224 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 MEGF9Q9H1U4 602 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 ARV1Q9H2C2 271 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 UQCC1Q9NVA1 299 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 C1RLQ9NZP8 487 aa9.9□□□□□ -0.82
CHMP3-204ENST00000409727 ZFHX3Q15911 3703 aa9.9□□□□□ -0.83
CHMP3-204ENST00000409727 RPS10-NUDT3A0A1W2PQS6 291 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 TEX46H3BTG2 121 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 LRRC75BQ2VPJ9 315 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
CHMP3-204ENST00000409727 NANPQ8TBE9 248 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 PIFOQ8TCI5 191 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 SLC25A33Q9BSK2 321 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 PLA2G2EQ9NZK7 142 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 ABCA1O95477 2261 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 ZANQ9Y493 2812 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 SPP1P10451 314 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 FGF7P21781 194 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 CX3CL1P78423 397 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 MLANAQ16655 118 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 DEFB112Q30KQ8 113 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 C2orf83Q53S99 150 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 TMEM182Q6ZP80 229 aaPredicted RBP9.89□□□□□ -0.83
CHMP3-204ENST00000409727 IL17RELQ6ZVW7 336 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 OR2G3Q8NGZ4 309 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 CXorf58Q96LI9 332 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 P2RX4Q99571 388 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 CREBBPQ92793 2442 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 ITPR3Q14573 2671 aa9.89□□□□□ -0.83
CHMP3-204ENST00000409727 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
CHMP3-204ENST00000409727 IGHV3-48P01763 117 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 NMBP08949 121 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 NDPQ00604 133 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 ATP6V1FQ16864 119 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 BSXQ3C1V8 233 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 CLLU1Q5K131 121 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
CHMP3-204ENST00000409727 ARPC1AQ92747 370 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 WDR61Q9GZS3 305 aaKnown RBP9.88□□□□□ -0.83
CHMP3-204ENST00000409727 FBXO7Q9Y3I1 522 aa9.88□□□□□ -0.83
CHMP3-204ENST00000409727 ZNF469Q96JG9 3925 aaPredicted RBP9.88□□□□□ -0.83
CHMP3-204ENST00000409727 NAV3Q8IVL0 2385 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 INS-IGF2F8WCM5 200 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 SEC11BP0C7V7 166 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 SUB1P53999 127 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHMP3-204ENST00000409727 ARSJQ5FYB0 599 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-204ENST00000409727 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 MISP3Q96FF7 219 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 RBM14Q96PK6 669 aaKnown RBP9.87□□□□□ -0.83
CHMP3-204ENST00000409727 HSPB9Q9BQS6 159 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 CSPG4Q6UVK1 2322 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 IGHV7-81A0A0B4J1V7 117 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 PRH1P02810 166 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 FAM157CP0CG43 387 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 OPRK1P41145 380 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 FHITP49789 147 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 AKR1C1Q04828 323 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 VWC2Q2TAL6 325 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 C5orf56Q8N8D9 126 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 TAF15Q92804 592 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHMP3-204ENST00000409727 GNPNAT1Q96EK6 184 aaPredicted RBP9.87□□□□□ -0.83
CHMP3-204ENST00000409727 PARP11Q9NR21 331 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 MOB4Q9Y3A3 225 aa9.87□□□□□ -0.83
CHMP3-204ENST00000409727 IGHV3-21A0A0B4J1V1 117 aa9.86□□□□□ -0.83
CHMP3-204ENST00000409727 SCAF4O95104 1147 aaKnown RBP9.86□□□□□ -0.83
CHMP3-204ENST00000409727 DEFA4P12838 97 aa9.86□□□□□ -0.83
CHMP3-204ENST00000409727 MFAP2P55001 183 aa9.86□□□□□ -0.83
CHMP3-204ENST00000409727 ELLP55199 621 aaPredicted RBP9.86□□□□□ -0.83
CHMP3-204ENST00000409727 DLK1P80370 383 aa9.86□□□□□ -0.83
CHMP3-204ENST00000409727 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
CHMP3-204ENST00000409727 SPNS3Q6ZMD2 512 aa9.86□□□□□ -0.83
CHMP3-204ENST00000409727 FSHBP01225 129 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 IGHV4-59P01825 116 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 SULT1A2P50226 295 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 NDUFA5Q16718 116 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 C9orf152Q5JTZ5 239 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 LFNGQ8NES3 379 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 OR2T6Q8NHC8 308 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 GGACTQ9BVM4 153 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 NPCDR1Q9BY65 106 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 LINC01548A6NM66 108 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 ATP6V1G1O75348 118 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 HLA-DRB1P01911 266 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 CAMLGP49069 296 aa9.85□□□□□ -0.83
CHMP3-204ENST00000409727 ATP5IP56385 69 aaPredicted RBP9.85□□□□□ -0.83
CHMP3-204ENST00000409727 BPIFB3P59826 476 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms