RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SLC24A4Q8NFF2 622 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 PARP11Q9NR21 331 aa13.3□□□□□ -0.28
SSB-202ENST00000409333 C15orf62A8K5M9 175 aa13.29□□□□□ -0.28
SSB-202ENST00000409333 ATP6V0E1O15342 81 aa13.29□□□□□ -0.28
SSB-202ENST00000409333 CST7O76096 145 aa13.29□□□□□ -0.28
SSB-202ENST00000409333 EGR2P11161 476 aaPredicted RBP13.29□□□□□ -0.28
SSB-202ENST00000409333 TMEM14EPQ6UXP3 125 aa13.29□□□□□ -0.28
SSB-202ENST00000409333 C19orf35Q6ZS72 473 aa13.29□□□□□ -0.28
SSB-202ENST00000409333 ESM1Q9NQ30 184 aa13.29□□□□□ -0.28
SSB-202ENST00000409333 ZC4H2Q9NQZ6 224 aa13.29□□□□□ -0.28
SSB-202ENST00000409333 STRAPQ9Y3F4 350 aaKnown RBP13.29□□□□□ -0.28
SSB-202ENST00000409333 LY86O95711 162 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 RNASE2P10153 161 aaKnown RBP13.28□□□□□ -0.28
SSB-202ENST00000409333 ERHP84090 104 aaKnown RBP13.28□□□□□ -0.28
SSB-202ENST00000409333 OR2F1Q13607 317 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 BSXQ3C1V8 233 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 ASPHD1Q5U4P2 390 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 HAPLN4Q86UW8 402 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 TMEM86BQ8N661 226 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 SLC25A31Q9H0C2 315 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 U3KQ87 197 aa13.28□□□□□ -0.28
SSB-202ENST00000409333 NPY1RP25929 384 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 HTR2BP41595 481 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 TMUB2Q71RG4 321 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 KCNRGQ8N5I3 272 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 TMEM217Q8N7C4 229 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 LFNGQ8NES3 379 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 SGMS2Q8NHU3 365 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 ARL6Q9H0F7 186 aa13.27□□□□□ -0.28
SSB-202ENST00000409333 PMS2P5A8MQ11 134 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 SNCAP37840 140 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 SULT1A1P50225 295 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 ARL16Q0P5N6 197 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 ECSCRQ19T08 205 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 STX12Q86Y82 276 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 P2RX4Q99571 388 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 SRSF8Q9BRL6 282 aaKnown RBP13.27□□□□□ -0.29
SSB-202ENST00000409333 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.29
SSB-202ENST00000409333 A0A0D9SG52 128 aa13.26□□□□□ -0.29
SSB-202ENST00000409333 IGHG2P01859 326 aa13.26□□□□□ -0.29
SSB-202ENST00000409333 OR8U8P0C7N1 319 aa13.26□□□□□ -0.29
SSB-202ENST00000409333 S100A11P31949 105 aa13.26□□□□□ -0.29
SSB-202ENST00000409333 RPP30P78346 268 aaKnown RBP13.26□□□□□ -0.29
SSB-202ENST00000409333 OR8G2PQ6IF36 304 aa13.26□□□□□ -0.29
SSB-202ENST00000409333 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
SSB-202ENST00000409333 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
SSB-202ENST00000409333 MAST4O15021 2626 aa13.26□□□□□ -0.29
SSB-202ENST00000409333 NF1P21359 2839 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 BAXQ07812 192 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 C2orf83Q53S99 150 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 SLC35E3Q7Z769 313 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 ZNF114Q8NC26 417 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 OR5C1Q8NGR4 320 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 FBXL17Q9UF56 701 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 G3V318 75 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 CTRB1P17538 263 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 MFAP2P55001 183 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 CTRB2Q6GPI1 263 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 ZNF418Q8TF45 676 aaPredicted RBP13.25□□□□□ -0.29
SSB-202ENST00000409333 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
SSB-202ENST00000409333 PRSS46E5RG02 174 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 IFNA4P05014 189 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 RAB11AP62491 216 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 CLINT1Q14677 625 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 TMEM95Q3KNT9 176 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 UNQ5815/PRO19632Q6UWF5 114 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 ETV3LQ6ZN32 361 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 WFDC1Q9HC57 220 aa13.24□□□□□ -0.29
SSB-202ENST00000409333 F11RQ9Y624 299 aaKnown RBP13.24□□□□□ -0.29
SSB-202ENST00000409333 NPIPB5A8MRT5 1133 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 BCL2L11O43521 198 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 CRLF1O75462 422 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 FAM157CP0CG43 387 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 HILS1P60008 231 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 SLC38A11Q08AI6 406 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 OPCMLQ14982 345 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 STPG2Q8N412 459 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 TTC9CQ8N5M4 171 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
SSB-202ENST00000409333 ARPC5LQ9BPX5 153 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 NPFFR1Q9GZQ6 430 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 WNT10AQ9GZT5 417 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 ZNF702PQ9H963 129 aa13.23□□□□□ -0.29
SSB-202ENST00000409333 KANTRA0A1W2PQU2 76 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 CLDN34H7C241 214 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 TRIM77I1YAP6 450 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 FBXO24O75426 580 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 PRH1P02810 166 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 IGF1P05019 195 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 CRYGCP07315 174 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
SSB-202ENST00000409333 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.293e-41■■■■■ 112.1
SSB-202ENST00000409333 AKIRIN2Q53H80 203 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 OR5T1Q8NG75 326 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 OR10P1Q8NGE3 313 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 OR1P1Q8NH06 330 aa13.22□□□□□ -0.29
SSB-202ENST00000409333 TAF15Q92804 592 aaKnown RBP eCLIP13.22□□□□□ -0.29
SSB-202ENST00000409333 TEP1Q99973 2627 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms