RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 K7ERU9 68 aa13.22□□□□□ -0.29
SSFA2-202ENST00000409001 LOXL3P58215 753 aa13.22□□□□□ -0.29
SSFA2-202ENST00000409001 ZFP36L1Q07352 338 aaKnown RBP13.22□□□□□ -0.29
SSFA2-202ENST00000409001 HERPUD1Q15011 391 aa13.22□□□□□ -0.29
SSFA2-202ENST00000409001 HERVK_113P61574 105 aa13.22□□□□□ -0.29
SSFA2-202ENST00000409001 RBPMS2Q6ZRY4 209 aaKnown RBP13.22□□□□□ -0.29
SSFA2-202ENST00000409001 GGNQ86UU5 652 aa13.22□□□□□ -0.29
SSFA2-202ENST00000409001 C5orf52A6NGY3 159 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.29
SSFA2-202ENST00000409001 ZSWIM8A7E2V4 1837 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 RBFOX2O43251 390 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSFA2-202ENST00000409001 C2orf83Q53S99 150 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 DNM1P46Q6ZS02 220 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 COL25A1Q9BXS0 654 aaPredicted RBP13.21□□□□□ -0.29
SSFA2-202ENST00000409001 UBE2CO00762 179 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 HLA-DRB1P01911 266 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 FAM106CPP0CH98 169 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 WDR82Q6UXN9 313 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 ZNF600Q6ZNG1 722 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 FAM19A2Q8N3H0 131 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 C14orf144Q96I85 54 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 C16orf92Q96LL3 132 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 RALYQ9UKM9 306 aaKnown RBP13.21□□□□□ -0.29
SSFA2-202ENST00000409001 RNF115Q9Y4L5 304 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 S4R3C0 116 aa13.21□□□□□ -0.29
SSFA2-202ENST00000409001 HBBP68871 147 aa13.21□□□□□ -0.3
SSFA2-202ENST00000409001 LYRM7Q5U5X0 104 aa13.21□□□□□ -0.3
SSFA2-202ENST00000409001 ZNF502Q8TBZ5 544 aa13.21□□□□□ -0.3
SSFA2-202ENST00000409001 KCNS1Q96KK3 526 aa13.21□□□□□ -0.3
SSFA2-202ENST00000409001 GAGE10A6NGK3 116 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 ZNF883P0CG24 379 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 MBNL2Q5VZF2 373 aaKnown RBP13.2□□□□□ -0.3
SSFA2-202ENST00000409001 C1orf162Q8NEQ5 155 aaPredicted RBP13.2□□□□□ -0.3
SSFA2-202ENST00000409001 FBXL15Q9H469 300 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 CXCL1P09341 107 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 MRPL20Q9BYC9 149 aaKnown RBP13.2□□□□□ -0.3
SSFA2-202ENST00000409001 IGHV3OR16-13A0A075B7E8 117 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 IGHV3-74A0A0B4J1X5 117 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 OR10AG1Q8NH19 301 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 RAB37Q96AX2 223 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 TMEM106BQ9NUM4 274 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
SSFA2-202ENST00000409001 PET117Q6UWS5 81 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 TMEM171Q8WVE6 324 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 CLDN16Q9Y5I7 305 aa13.2□□□□□ -0.3
SSFA2-202ENST00000409001 CCL3L1P16619 93 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 GFRA1P56159 465 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 GFI1BQ5VTD9 330 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 RNASE7Q9H1E1 156 aaKnown RBP13.19□□□□□ -0.3
SSFA2-202ENST00000409001 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 PEX7O00628 323 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 TFPI2P48307 235 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.19□□□□□ -0.3
SSFA2-202ENST00000409001 TSC2P49815 1807 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 CYB5R2Q6BCY4 276 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 SERF1AO75920 110 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
SSFA2-202ENST00000409001 PF4V1P10720 104 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 DLX1P56177 255 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 TBR1Q16650 682 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 MORN2Q502X0 79 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 TMEM144Q7Z5S9 345 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 ST6GALNAC3Q8NDV1 305 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 MBD3L1Q8WWY6 194 aa13.19□□□□□ -0.3
SSFA2-202ENST00000409001 ZNF207O43670 478 aaKnown RBP13.18□□□□□ -0.3
SSFA2-202ENST00000409001 ZCCHC24Q8N2G6 241 aaKnown RBP13.18□□□□□ -0.3
SSFA2-202ENST00000409001 METTL26Q96S19 204 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 AUP1Q9Y679 476 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 GCSHP23434 173 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 USF3Q68DE3 2245 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 LIPFP07098 398 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 HGFACQ04756 655 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 NMSQ5H8A3 153 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 LINC01560Q8TB33 94 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
SSFA2-202ENST00000409001 OR52E5Q8NH55 327 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 TMEM70Q9BUB7 260 aa13.18□□□□□ -0.3
SSFA2-202ENST00000409001 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.31e-7■■■■■ 26.8
SSFA2-202ENST00000409001 TRAV30A0A087WSZ9 112 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 YPEL1O60688 119 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 ANOS1P23352 680 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 YPEL2Q96QA6 119 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 WDR83OSQ9Y284 106 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 IGKV3D-15A0A087WSY6 115 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 TM4SF5O14894 197 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 SAA1P0DJI8 122 aaPredicted RBP13.17□□□□□ -0.3
SSFA2-202ENST00000409001 ADCYAP1P18509 176 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 DUTP33316 252 aaKnown RBP13.17□□□□□ -0.3
SSFA2-202ENST00000409001 TTC28Q96AY4 2481 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 PSPNO60542 156 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 RPP25LQ8N5L8 163 aaKnown RBP13.17□□□□□ -0.3
SSFA2-202ENST00000409001 OCC1Q8TAD7 63 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 MAP1LC3AQ9H492 121 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 DOCK9Q9BZ29 2069 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 NPIPB11E5RHQ5 1161 aa13.17□□□□□ -0.3
SSFA2-202ENST00000409001 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms