RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 DEPPQ9NTK1 212 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 RNF115Q9Y4L5 304 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 PEX7O00628 323 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 FAM27E3Q08E93 113 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 PNKDQ8N490 385 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 TMEM170AQ8WVE7 144 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 C14orf144Q96I85 54 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 DOCK8Q8NF50 2099 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 LRRK1Q38SD2 2015 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 PSG9Q00887 426 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 ZNF497Q6ZNH5 498 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 MBD3L1Q8WWY6 194 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 FANCMQ8IYD8 2048 aa12.24□□□□□ -0.45
PCNX4-203ENST00000406854 TRAV9-1A0A075B6T8 112 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 TM4SF5O14894 197 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 H3BVH4 76 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 RAMP3O60896 148 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 ZNF883P0CG24 379 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 PF4V1P10720 104 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 GFRA1P56159 465 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 PLP1P60201 277 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 ACSF3Q4G176 576 aaPredicted RBP12.23□□□□□ -0.45
PCNX4-203ENST00000406854 ZNF324BQ6AW86 544 aaPredicted RBP12.23□□□□□ -0.45
PCNX4-203ENST00000406854 NABP1Q96AH0 204 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 MED13LQ71F56 2210 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 A6NJY4 79 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 NPIPB11E5RHQ5 1161 aa12.23□□□□□ -0.45
PCNX4-203ENST00000406854 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.45
PCNX4-203ENST00000406854 RELQ04864 619 aaPredicted RBP12.23□□□□□ -0.45
PCNX4-203ENST00000406854 TAS2R60P59551 318 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 CX3CL1P78423 397 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 LEMD1Q68G75 181 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 RLFQ13129 1914 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 A0A1W2PS18 150 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 SERF1AO75920 110 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 TM4SF20Q53R12 229 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 SAPCD1Q5SSQ6 148 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 FAM19A2Q8N3H0 131 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 OR52E5Q8NH55 327 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 NDUFAF3Q9BU61 184 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 TMEM106BQ9NUM4 274 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 WDR83OSQ9Y284 106 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 SIP14410 1827 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 LOC107984156A0A0G2JMH3 177 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 YPEL1O60688 119 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 C17orf82Q86X59 251 aaPredicted RBP12.22□□□□□ -0.45
PCNX4-203ENST00000406854 ARL17AQ8IVW1 177 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 YPEL2Q96QA6 119 aa12.22□□□□□ -0.45
PCNX4-203ENST00000406854 SCN5AQ14524 2016 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.21□□□□□ -0.455e-7■■■■■ 38.3
PCNX4-203ENST00000406854 TRBV24-1A0A075B6N3 115 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 IGKV1-27A0A075B6S5 117 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 NUDT3O95989 172 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 UCNP55089 124 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 TCF23Q7RTU1 214 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 FAM90A1Q86YD7 464 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 FAM131CQ96AQ9 280 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 FBXL15Q9H469 300 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 PHLDA3Q9Y5J5 127 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 ABCA4P78363 2273 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 ZNF407Q9C0G0 2248 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 PRDM13Q9H4Q3 707 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 VSIRQ9H7M9 311 aa12.21□□□□□ -0.45
PCNX4-203ENST00000406854 PGPEP1LA6NFU8 196 aa12.21□□□□□ -0.46
PCNX4-203ENST00000406854 TFPI2P48307 235 aa12.21□□□□□ -0.46
PCNX4-203ENST00000406854 RAB9AP51151 201 aa12.21□□□□□ -0.46
PCNX4-203ENST00000406854 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.46
PCNX4-203ENST00000406854 A0A1B0GUT8 65 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 C5orf63A6NC05 138 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 JOSD1Q15040 202 aaPredicted RBP12.2□□□□□ -0.46
PCNX4-203ENST00000406854 WDR82Q6UXN9 313 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 HIST1H4GQ99525 98 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 MRPL20Q9BYC9 149 aaKnown RBP12.2□□□□□ -0.46
PCNX4-203ENST00000406854 B9A039 149 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 CLPSP04118 112 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 MORN2Q502X0 79 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
PCNX4-203ENST00000406854 F11RQ9Y624 299 aaKnown RBP12.2□□□□□ -0.46
PCNX4-203ENST00000406854 CXCL1P09341 107 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 QRFPP83859 136 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 FHL1Q13642 323 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
PCNX4-203ENST00000406854 VWA8A3KMH1 1905 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 LOC105371242A0A075B767 164 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
PCNX4-203ENST00000406854 SRSF4Q08170 494 aaKnown RBP12.19□□□□□ -0.46
PCNX4-203ENST00000406854 RTN4RL2Q86UN3 420 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 LINC00469Q8N7U9 141 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 C9orf106Q8NAJ2 232 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 OCC1Q8TAD7 63 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 RNASEH2CQ8TDP1 164 aaKnown RBP12.19□□□□□ -0.46
PCNX4-203ENST00000406854 GPR82Q96P67 336 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 KLK15Q9H2R5 256 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 NRN1Q9NPD7 142 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 TMEM242Q9NWH2 141 aa12.19□□□□□ -0.46
PCNX4-203ENST00000406854 ZFP36L1Q07352 338 aaKnown RBP12.19□□□□□ -0.46
PCNX4-203ENST00000406854 C7orf71A4D174 169 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms