RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SNRNP70P08621 437 aaKnown RBP11.28□□□□□ -0.6
PRAME-205ENST00000405655 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
PRAME-205ENST00000405655 SERF2P84101 59 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 SSX2Q16385 188 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 TNXAQ16473 311 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
PRAME-205ENST00000405655 TMEM167AQ8TBQ9 72 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 PUS1Q9Y606 427 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRAME-205ENST00000405655 IGHV3OR16-10A0A075B7F0 116 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 FSTL3O95633 263 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 COL8A1P27658 744 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 MFAP2P55001 183 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 B2MP61769 119 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 PSG5Q15238 335 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 ZNF709Q8N972 641 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 CLRN3Q8NCR9 226 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 PARD6GQ9BYG4 376 aaPredicted RBP11.28□□□□□ -0.6
PRAME-205ENST00000405655 SLC35B3Q9H1N7 401 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 KIAA1456Q9P272 454 aa11.28□□□□□ -0.6
PRAME-205ENST00000405655 ZNF469Q96JG9 3925 aaPredicted RBP11.27□□□□□ -0.6
PRAME-205ENST00000405655 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 OVOL3O00110 214 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 LMO4P61968 165 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 RAB11AP62491 216 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 KIAA0141Q14154 515 aaPredicted RBP11.27□□□□□ -0.6
PRAME-205ENST00000405655 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.6
PRAME-205ENST00000405655 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.6
PRAME-205ENST00000405655 ZNF257Q9Y2Q1 563 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.6
PRAME-205ENST00000405655 M0R036 132 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 FOXH1O75593 365 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 ACTL6BO94805 426 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 GAMTQ14353 236 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 AWAT1Q58HT5 328 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 OR1L8Q8NGR8 309 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.61
PRAME-205ENST00000405655 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.61
PRAME-205ENST00000405655 TIMM9Q9Y5J7 89 aa11.27□□□□□ -0.61
PRAME-205ENST00000405655 CRYGBP07316 175 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 USF1P22415 310 aaPredicted RBP11.26□□□□□ -0.61
PRAME-205ENST00000405655 IL3RAP26951 378 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 UBE2G2P60604 165 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 RPP30P78346 268 aaKnown RBP11.26□□□□□ -0.61
PRAME-205ENST00000405655 ZNF506Q5JVG8 444 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 TPTE2P1Q5T6R2 138 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 COMMD1Q8N668 190 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 ISOC2Q96AB3 205 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 A0A1W2PPH5 198 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 HOXB4P17483 251 aaPredicted RBP11.26□□□□□ -0.61
PRAME-205ENST00000405655 DLK1P80370 383 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 PAX2Q02962 417 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 PRSS8Q16651 343 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 FAM71F2Q6NXP2 309 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 OR5B3Q8NH48 314 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 ABHD5Q8WTS1 349 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 P2RX4Q99571 388 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 GSX1Q9H4S2 264 aaPredicted RBP11.26□□□□□ -0.61
PRAME-205ENST00000405655 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
PRAME-205ENST00000405655 SIGLEC9Q9Y336 463 aa11.26□□□□□ -0.61
PRAME-205ENST00000405655 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
PRAME-205ENST00000405655 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.25□□□□□ -0.615e-19■■■□□ 17.5
PRAME-205ENST00000405655 HTR1DP28221 377 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 MC5RP33032 325 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 BSXQ3C1V8 233 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 VMA21Q3ZAQ7 101 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 STPG3Q8N7X2 389 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 LFNGQ8NES3 379 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 CCL19Q99731 98 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 NPVFQ9HCQ7 196 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 RPS10P5Q9NQ39 176 aa11.25□□□□□ -0.61
PRAME-205ENST00000405655 TRAV1-1A0A0B4J248 108 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 ZNF727A8MUV8 499 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 VENTXO95231 258 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 SNAPINO95295 136 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 SNRPCP09234 159 aaKnown RBP11.24□□□□□ -0.61
PRAME-205ENST00000405655 BCL2P10415 239 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 PRTN3P24158 256 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 SOHLH1Q5JUK2 328 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 FAM120AOSQ5T036 256 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 CFHR4Q92496 578 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 IGHV4-61A0A0C4DH41 118 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 CTXND1A0A1B0GTU2 59 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 C7orf77A4D0Y5 90 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 ODF3BA8MYP8 253 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 LINC00869P0C866 280 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 ATF4P18848 351 aaPredicted RBP11.24□□□□□ -0.61
PRAME-205ENST00000405655 OR10J1P30954 320 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 CDC34P49427 236 aaPredicted RBP11.24□□□□□ -0.61
PRAME-205ENST00000405655 CD81P60033 236 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 HES1Q14469 280 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 TEPPQ6URK8 271 aa11.24□□□□□ -0.61
PRAME-205ENST00000405655 OR11H6Q8NGC7 330 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms