RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 GFI1Q99684 422 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 CLEC7AQ9BXN2 247 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 TRBV6-7A0A0A0MS04 114 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
SNED1-205ENST00000405547 GLRX5Q86SX6 157 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 C7orf71A4D174 169 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 PPP1R17O96001 155 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 ZNRF1Q8ND25 227 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 ZNF324BQ6AW86 544 aaPredicted RBP11.28□□□□□ -0.6
SNED1-205ENST00000405547 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
SNED1-205ENST00000405547 SGK494Q96LW2 274 aa11.28□□□□□ -0.6
SNED1-205ENST00000405547 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
SNED1-205ENST00000405547 IGLV3-19P01714 112 aa11.27□□□□□ -0.6
SNED1-205ENST00000405547 FAM90A1Q86YD7 464 aa11.27□□□□□ -0.6
SNED1-205ENST00000405547 PAQR4Q8N4S7 273 aaPredicted RBP11.27□□□□□ -0.6
SNED1-205ENST00000405547 IZUMO1RA6ND01 250 aa11.27□□□□□ -0.6
SNED1-205ENST00000405547 GPR6P46095 362 aaPredicted RBP11.27□□□□□ -0.6
SNED1-205ENST00000405547 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.6
SNED1-205ENST00000405547 KIR2DL4Q99706 377 aa11.27□□□□□ -0.6
SNED1-205ENST00000405547 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 CCL21O00585 134 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
SNED1-205ENST00000405547 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 IFI27L2Q9H2X8 130 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 MED13Q9UHV7 2174 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 H7C2G1 150 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 TIMM23BQ5SRD1 257 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 LINC00271P0C7V0 271 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 IGFBP2P18065 325 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 PRDM13Q9H4Q3 707 aa11.27□□□□□ -0.61
SNED1-205ENST00000405547 HIGD1CA8MV81 97 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 DLX6P56179 175 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 CCL20P78556 96 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 ATP5LO75964 103 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 SRSF7Q16629 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNED1-205ENST00000405547 TMEM106BQ9NUM4 274 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 IL4P05112 153 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
SNED1-205ENST00000405547 A0A1B0GW64 132 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 ATP5G3P48201 142 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 FOXA3P55318 350 aaPredicted RBP11.26□□□□□ -0.61
SNED1-205ENST00000405547 PPIAL4CA0A0B4J2A2 164 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 IGHV3-48P01763 117 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 PPIAL4GP0DN37 164 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 ID3Q02535 119 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 HIST1H1AQ02539 215 aaPredicted RBP11.26□□□□□ -0.61
SNED1-205ENST00000405547 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 WFDC3Q8IUB2 231 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 ZNF703Q9H7S9 590 aaPredicted RBP11.26□□□□□ -0.61
SNED1-205ENST00000405547 IGKV1-9A0A0C4DH69 117 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 EAF1Q96JC9 268 aaPredicted RBP11.26□□□□□ -0.61
SNED1-205ENST00000405547 COLCA2A8K830 154 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 PPP1R32Q7Z5V6 425 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 TIMP4Q99727 224 aa11.26□□□□□ -0.61
SNED1-205ENST00000405547 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 IGLV3-32A0A0A0MS00 114 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 PRSS2P07478 247 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 ADIPOQQ15848 244 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 REG4Q9BYZ8 158 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 C1QTNF9BB2RNN3 333 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 OR11H2Q8NH07 326 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 IGLV3-12A0A075B6K2 115 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 NPIPB11E5RHQ5 1161 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 RPP21Q9H633 154 aaKnown RBP11.25□□□□□ -0.61
SNED1-205ENST00000405547 CHODLQ9H9P2 273 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 TRAV1-1A0A0B4J248 108 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 SERF1AO75920 110 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 ZNF497Q6ZNH5 498 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 CLDN16Q9Y5I7 305 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 ATRXP46100 2492 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 TMEM171Q8WVE6 324 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 FOXD3Q9UJU5 478 aaPredicted RBP11.25□□□□□ -0.61
SNED1-205ENST00000405547 PCNX3Q9H6A9 2034 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 HIST1H2BLQ99880 126 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
SNED1-205ENST00000405547 HCFC1P51610 2035 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 LAMTOR2Q9Y2Q5 125 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 A0A0A6YYD4 124 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 MOSP00540 346 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 FAM19A2Q8N3H0 131 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 GPR82Q96P67 336 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 A0A1B0GV72 72 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 RSPO4Q2I0M5 234 aaPredicted RBP11.24□□□□□ -0.61
SNED1-205ENST00000405547 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 OR52E5Q8NH55 327 aa11.24□□□□□ -0.61
SNED1-205ENST00000405547 TMEM160Q9NX00 188 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms