RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SRSF12Q8WXF0 261 aaKnown RBP2.95□□□□□ -1.94
RTN4-208ENST00000404909 RASL11BQ9BPW5 248 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 C1RLQ9NZP8 487 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 UBQLN2Q9UHD9 624 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 JMJD1CQ15652 2540 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 UBE2L5PA0A1B0GUS4 154 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 A0A1W2PN81 502 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 CGB1A6NKQ9 187 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 IFNA5P01569 189 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 CHRNA7P36544 502 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 HTR2BP41595 481 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 CX3CL1P78423 397 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 EBI3Q14213 229 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 ZNF266Q14584 549 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 TUSC1Q2TAM9 212 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 LRRC75BQ2VPJ9 315 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 PDLIM3Q53GG5 364 aaPredicted RBP2.95□□□□□ -1.94
RTN4-208ENST00000404909 C9orf152Q5JTZ5 239 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 THNSL2Q86YJ6 484 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 TMEM170AQ8WVE7 144 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 PINX1Q96BK5 328 aaKnown RBP2.95□□□□□ -1.94
RTN4-208ENST00000404909 ATP5SQ99766 215 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 SLC25A33Q9BSK2 321 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 SH3BGRL3Q9H299 93 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 RFNGQ9Y644 331 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 DFFBO76075 338 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 NDUFA3O95167 84 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 IGHV3-48P01763 117 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 DEFA4P12838 97 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 MAS1LP35410 378 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 SRP14P37108 136 aaKnown RBP2.95□□□□□ -1.94
RTN4-208ENST00000404909 EIF5AP63241 154 aaKnown RBP2.95□□□□□ -1.94
RTN4-208ENST00000404909 RUNX1Q01196 453 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 ZNF767PQ75MW2 155 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 Q8N6K4 173 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 Q8N9W7 124 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 PIFOQ8TCI5 191 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 SCGB1C1Q8TD33 95 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 MEGF9Q9H1U4 602 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 SLC25A32Q9H2D1 315 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 YAE1D1Q9NRH1 226 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 F8P00451 2351 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 IGHV3-21A0A0B4J1V1 117 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 IGLC7A0M8Q6 106 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 RGS13O14921 159 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 LY86O95711 162 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 IGHV4-59P01825 116 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 RAB14P61106 215 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 SSBP2P81877 361 aaPredicted RBP2.95□□□□□ -1.94
RTN4-208ENST00000404909 NDPQ00604 133 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 UBAC2Q8NBM4 344 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 LFNGQ8NES3 379 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 STOML3Q8TAV4 291 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 ARPC1AQ92747 370 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 MISP3Q96FF7 219 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 SMR3AQ99954 134 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 PARP11Q9NR21 331 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 UQCC1Q9NVA1 299 aa2.95□□□□□ -1.94
RTN4-208ENST00000404909 TEP1Q99973 2627 aaKnown RBP2.95□□□□□ -1.94
RTN4-208ENST00000404909 CUBNO60494 3623 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 PMS2P5A8MQ11 134 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 TEX22C9J3V5 150 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 PRH1P02810 166 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 RNASE2P10153 161 aaKnown RBP2.94□□□□□ -1.94
RTN4-208ENST00000404909 ATP6V0CP27449 155 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 OPRK1P41145 380 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 SUB1P53999 127 aaKnown RBP eCLIP2.94□□□□□ -1.947e-16■■■□□ 18.3
RTN4-208ENST00000404909 AKR1C1Q04828 323 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 MLANAQ16655 118 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ECSCRQ19T08 205 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ANKRD39Q53RE8 183 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ZNF562Q6V9R5 426 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 MRPL41Q8IXM3 137 aaKnown RBP2.94□□□□□ -1.94
RTN4-208ENST00000404909 OR2G3Q8NGZ4 309 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 SCARB1Q8WTV0 552 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 RBM14Q96PK6 669 aaKnown RBP2.94□□□□□ -1.94
RTN4-208ENST00000404909 DUX5Q96PT3 197 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 P2RX4Q99571 388 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 HSPB9Q9BQS6 159 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 RSG1Q9BU20 258 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 TMUB1Q9BVT8 246 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ANK3Q12955 4377 aaKnown RBP2.94□□□□□ -1.94
RTN4-208ENST00000404909 IGHV7-81A0A0B4J1V7 117 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 BTBD17A6NE02 478 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 TEX46H3BTG2 121 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 FGF7P21781 194 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 BPIFB3P59826 476 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 EIF5AL1Q6IS14 154 aaKnown RBP2.94□□□□□ -1.94
RTN4-208ENST00000404909 TMEM182Q6ZP80 229 aaPredicted RBP2.94□□□□□ -1.94
RTN4-208ENST00000404909 OR5T1Q8NG75 326 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ACY3Q96HD9 319 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 TMEM147Q9BVK8 224 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 LINC00527Q9UJ94 153 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 MOB4Q9Y3A3 225 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 FBXO7Q9Y3I1 522 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 LINC01548A6NM66 108 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ATP6V1FQ16864 119 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 C2orf83Q53S99 150 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 BTNL8Q6UX41 500 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 Q71RC1 249 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms