RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SNCAP37840 140 aa16.77■□□□□ 0.28
TPM1-208ENST00000404484 COMPP49747 757 aaPredicted RBP16.77■□□□□ 0.28
TPM1-208ENST00000404484 BPIFB3P59826 476 aa16.77■□□□□ 0.28
TPM1-208ENST00000404484 TNXAQ16473 311 aa16.77■□□□□ 0.28
TPM1-208ENST00000404484 ETV3LQ6ZN32 361 aa16.77■□□□□ 0.28
TPM1-208ENST00000404484 Q8N6K4 173 aa16.77■□□□□ 0.28
TPM1-208ENST00000404484 RNF141Q8WVD5 230 aa16.77■□□□□ 0.28
TPM1-208ENST00000404484 UQCC1Q9NVA1 299 aa16.77■□□□□ 0.28
TPM1-208ENST00000404484 IFNA4P05014 189 aa16.77■□□□□ 0.27
TPM1-208ENST00000404484 PJVKQ0ZLH3 352 aa16.77■□□□□ 0.27
TPM1-208ENST00000404484 MRGPRG-AS1Q2M3A8 158 aa16.77■□□□□ 0.27
TPM1-208ENST00000404484 HSD17B13Q7Z5P4 300 aaPredicted RBP16.77■□□□□ 0.27
TPM1-208ENST00000404484 HSD17B11Q8NBQ5 300 aa16.77■□□□□ 0.27
TPM1-208ENST00000404484 CUBNO60494 3623 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 FBXO24O75426 580 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 SPP1P10451 314 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 PAX6P26367 422 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 SUB1P53999 127 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM1-208ENST00000404484 C5orf64Q2M2E5 130 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 C2orf83Q53S99 150 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 FAM120AOSQ5T036 256 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 RUSC1-AS1Q66K80 236 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 SRSF8Q9BRL6 282 aaKnown RBP16.76■□□□□ 0.27
TPM1-208ENST00000404484 CDC42EP3Q9UKI2 254 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 FAM96BQ9Y3D0 163 aa16.76■□□□□ 0.27
TPM1-208ENST00000404484 IGHV3OR16-10A0A075B7F0 116 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 CA2P00918 260 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 NMBP08949 121 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 IGHV4-38-2P0DP08 117 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 CD24P25063 80 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 BSXQ3C1V8 233 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 FAM74A1Q5RGS3 127 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 C10orf55Q5SWW7 151 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 MEGF9Q9H1U4 602 aa16.75■□□□□ 0.27
TPM1-208ENST00000404484 ATP6V0CP27449 155 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 GNB1P62873 340 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 DLK1P80370 383 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 VWC2Q2TAL6 325 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 BRD3OSQ6XYD6 125 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 IL17RELQ6ZVW7 336 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 PRIMA1Q86XR5 153 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 OR10W1Q8NGF6 305 aa16.74■□□□□ 0.27
TPM1-208ENST00000404484 MXRA5Q9NR99 2828 aa16.73■□□□□ 0.27
TPM1-208ENST00000404484 NCBP2LA6PVI3 153 aaKnown RBP16.73■□□□□ 0.27
TPM1-208ENST00000404484 FBP1P09467 338 aa16.73■□□□□ 0.27
TPM1-208ENST00000404484 SULT1A2P50226 295 aa16.73■□□□□ 0.27
TPM1-208ENST00000404484 RAB5CP51148 216 aa16.73■□□□□ 0.27
TPM1-208ENST00000404484 LRRC75BQ2VPJ9 315 aa16.73■□□□□ 0.27
TPM1-208ENST00000404484 WDR61Q9GZS3 305 aaKnown RBP16.73■□□□□ 0.27
TPM1-208ENST00000404484 UBE2L5PA0A1B0GUS4 154 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 CGB1A6NKQ9 187 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 CNIH1O95406 144 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 RNASE2P10153 161 aaKnown RBP16.72■□□□□ 0.27
TPM1-208ENST00000404484 TMEM170AQ8WVE7 144 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 SRSF12Q8WXF0 261 aaKnown RBP16.72■□□□□ 0.27
TPM1-208ENST00000404484 A0A0U1RQK1 487 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 LINC00862A6NCI5 91 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 UMAD1C9J7I0 102 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 PRSS46E5RG02 174 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 FNDC10F2Z333 226 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 FGF16O43320 207 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 OR13C7P0DN81 318 aa16.72■□□□□ 0.27
TPM1-208ENST00000404484 KLF17Q5JT82 389 aaPredicted RBP16.72■□□□□ 0.27
TPM1-208ENST00000404484 SAT2Q96F10 170 aaPredicted RBP16.72■□□□□ 0.27
TPM1-208ENST00000404484 PSMG3Q9BT73 122 aaPredicted RBP16.72■□□□□ 0.27
TPM1-208ENST00000404484 ATRQ13535 2644 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 IGLC7A0M8Q6 106 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 E7EUB6 86 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 WT1-ASQ06250 92 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 ZNF114Q8NC26 417 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 OR2G3Q8NGZ4 309 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 TAF15Q92804 592 aaKnown RBP eCLIP16.71■□□□□ 0.27
TPM1-208ENST00000404484 SH3BGRL3Q9H299 93 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 TIMM9Q9Y5J7 89 aa16.71■□□□□ 0.27
TPM1-208ENST00000404484 A0A1B0GW64 132 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 TRIM77I1YAP6 450 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 FCN1O00602 326 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 TSPAN9O75954 239 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 AVPP01185 164 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 FAM157CP0CG43 387 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 AANATQ16613 207 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 TUSC1Q2TAM9 212 aa16.7■□□□□ 0.26
TPM1-208ENST00000404484 RNASEH2CQ8TDP1 164 aaKnown RBP16.7■□□□□ 0.26
TPM1-208ENST00000404484 PCNPQ8WW12 178 aaKnown RBP16.7■□□□□ 0.26
TPM1-208ENST00000404484 ZNF705EA8MWA4 302 aaPredicted RBP16.69■□□□□ 0.26
TPM1-208ENST00000404484 MPDU1O75352 247 aa16.69■□□□□ 0.26
TPM1-208ENST00000404484 BLOC1S1P78537 153 aa16.69■□□□□ 0.26
TPM1-208ENST00000404484 KRTAP21-3Q3LHN1 58 aa16.69■□□□□ 0.26
TPM1-208ENST00000404484 ZNF562Q6V9R5 426 aa16.69■□□□□ 0.26
TPM1-208ENST00000404484 MED9Q9NWA0 146 aa16.69■□□□□ 0.26
TPM1-208ENST00000404484 TEX22C9J3V5 150 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 ATP6V1G1O75348 118 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 FGF7P21781 194 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 SSBP2P81877 361 aaPredicted RBP16.68■□□□□ 0.26
TPM1-208ENST00000404484 RUNX1Q01196 453 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 FXYD3Q14802 87 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 SLC7A5P1Q8MH63 180 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 TEX29Q8N6K0 151 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 ZNF709Q8N972 641 aa16.68■□□□□ 0.26
TPM1-208ENST00000404484 NANPQ8TBE9 248 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms