RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 WDR89Q96FK6 387 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-201ENST00000404210 SMIM8Q96KF7 97 aa9.65□□□□□ -0.86
LINC00339-201ENST00000404210 RAB40CQ96S21 281 aa9.65□□□□□ -0.86
LINC00339-201ENST00000404210 MAGT1Q9H0U3 335 aa9.65□□□□□ -0.86
LINC00339-201ENST00000404210 U3KQ87 197 aa9.65□□□□□ -0.86
LINC00339-201ENST00000404210 A0A1B0GVG6 124 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 FBXO24O75426 580 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 IGLV1-40P01703 118 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 ELANEP08246 267 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 SNCAP37840 140 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 HTR2BP41595 481 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 BCAP31P51572 246 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 PROK1P58294 105 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 RAP2BP61225 183 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 RPP30P78346 268 aaKnown RBP9.64□□□□□ -0.87
LINC00339-201ENST00000404210 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 NOXA1Q86UR1 476 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 KLHDC1Q8N7A1 406 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 ZNF114Q8NC26 417 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 WIPF2Q8TF74 440 aaPredicted RBP9.64□□□□□ -0.87
LINC00339-201ENST00000404210 PPP1R1CQ8WVI7 109 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 TMEM158Q8WZ71 300 aa9.64□□□□□ -0.87
LINC00339-201ENST00000404210 RCL1Q9Y2P8 373 aaKnown RBP9.64□□□□□ -0.87
LINC00339-201ENST00000404210 LSM5Q9Y4Y9 91 aaKnown RBP9.64□□□□□ -0.87
LINC00339-201ENST00000404210 F11RQ9Y624 299 aaKnown RBP9.64□□□□□ -0.87
LINC00339-201ENST00000404210 hCG_2014768A0A024R1R8 64 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 CYB5BO43169 146 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 SOX15O60248 233 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 REG1AP05451 166 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 RNASE2P10153 161 aaKnown RBP9.63□□□□□ -0.87
LINC00339-201ENST00000404210 IAPPP10997 89 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 DEFA4P12838 97 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 HIST1H1BP16401 226 aaKnown RBP9.63□□□□□ -0.87
LINC00339-201ENST00000404210 PVALBP20472 110 aaPredicted RBP9.63□□□□□ -0.87
LINC00339-201ENST00000404210 PAX9P55771 341 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 PVRIGQ6DKI7 326 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 ZNF329Q86UD4 541 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 OR5AU1Q8NGC0 362 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 OR1P1Q8NH06 330 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 P2RX4Q99571 388 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 ZNF355PQ9NSJ1 428 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 PSENENQ9NZ42 101 aa9.63□□□□□ -0.87
LINC00339-201ENST00000404210 TRBV9A0A0B4J1U6 114 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 L7N2F9 121 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 SSSCA1O60232 199 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 DEDDO75618 318 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 MPC2O95563 127 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 IFNA10P01566 189 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 PET100P0DJ07 73 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 PSMB8P28062 276 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 RAB9AP51151 201 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 S100A10P60903 97 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 RPL23AP62750 156 aaKnown RBP9.62□□□□□ -0.87
LINC00339-201ENST00000404210 VAMP2P63027 116 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 FGL1Q08830 312 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 FOXE3Q13461 319 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 SLC25A24Q6NUK1 477 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 RNF152Q8N8N0 203 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 SLC24A4Q8NFF2 622 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 FANCD2OSQ96PS1 177 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 RNF126Q9BV68 326 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 C19orf24Q9BVV8 132 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 THYN1Q9P016 225 aa9.62□□□□□ -0.87
LINC00339-201ENST00000404210 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 E5RGE8 158 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 H0YIZ8 118 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 TSC22D2O75157 780 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 TMEM50AO95807 157 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 LYL1P12980 280 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 NPY1RP25929 384 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 MFAP2P55001 183 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 RIPPLY3P57055 190 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 RAB11AP62491 216 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 CD83Q01151 205 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 LRRC37A5PQ49AS3 106 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 AWAT1Q58HT5 328 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 SPANXN5Q5MJ07 72 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 PRSS54Q6PEW0 395 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 TMEM65Q6PI78 240 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 C10orf99Q6UWK7 81 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 OR4X2Q8NGF9 303 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 MS4A10Q96PG2 267 aa9.61□□□□□ -0.87
LINC00339-201ENST00000404210 STRAPQ9Y3F4 350 aaKnown RBP9.61□□□□□ -0.87
LINC00339-201ENST00000404210 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
LINC00339-201ENST00000404210 C2CD3Q4AC94 2353 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 CORTO00230 105 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 CCNKO75909 580 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 PRH1P02810 166 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 TRGV3P03979 118 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 PF4V1P10720 104 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 P2RY1P47900 373 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 KIAA0141Q14154 515 aaPredicted RBP9.6□□□□□ -0.87
LINC00339-201ENST00000404210 C11orf87Q6NUJ2 197 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 TMEM14EPQ6UXP3 125 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 NECAP1Q8NC96 275 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 OR2T35Q8NGX2 323 aa9.6□□□□□ -0.87
LINC00339-201ENST00000404210 THAP6Q8TBB0 222 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms