RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 IGKV1D-12P01611 117 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 UQCRFS1P47985 274 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 NABP1Q96AH0 204 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 TCF21O43680 179 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 RAMP3O60896 148 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 SRP19P09132 144 aaKnown RBP15.22■□□□□ 0.03
COL18A1-204ENST00000400337 MORN2Q502X0 79 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 TCF24Q7RTU0 167 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 ARPC1AQ92747 370 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 SCO2A0A1W2PP80 73 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 GPR183P32249 361 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 ATP5G3P48201 142 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 SAPCD1Q5SSQ6 148 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 FAM74A4Q5TZK3 123 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 PPP1R27Q86WC6 154 aa15.22■□□□□ 0.03
COL18A1-204ENST00000400337 LYNX1G3V0Z9 82 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 STAG3L2P0CL84 134 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 LYNX1P0DP58 116 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 AMMECR1LQ6DCA0 310 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 SPACA3Q8IXA5 215 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 GCSHP23434 173 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 SNRPD3P62318 126 aaKnown RBP15.21■□□□□ 0.03
COL18A1-204ENST00000400337 KLK15Q9H2R5 256 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 SMAGPQ0VAQ4 97 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 MIR17HGQ75NE6 70 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 GPR82Q96P67 336 aa15.21■□□□□ 0.03
COL18A1-204ENST00000400337 SLC17A3O00476 420 aa15.21■□□□□ 0.02
COL18A1-204ENST00000400337 OR52E5Q8NH55 327 aa15.21■□□□□ 0.02
COL18A1-204ENST00000400337 GTF3AQ92664 365 aaKnown RBP15.21■□□□□ 0.02
COL18A1-204ENST00000400337 FREM3P0C091 2139 aa15.21■□□□□ 0.02
COL18A1-204ENST00000400337 SPTBN1Q01082 2364 aaKnown RBP15.2■□□□□ 0.02
COL18A1-204ENST00000400337 TSPOP30536 169 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 Q0VFX4 171 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 CARHSP1Q9Y2V2 147 aaKnown RBP15.2■□□□□ 0.02
COL18A1-204ENST00000400337 FBLL1A6NHQ2 334 aaKnown RBP15.2■□□□□ 0.02
COL18A1-204ENST00000400337 TEX45Q8NA69 505 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 C7orf69Q9H7B7 122 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 GPR179Q6PRD1 2367 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 TRBV9A0A0B4J1U6 114 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 FOLR2P14207 255 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 CACNG8Q8WXS5 425 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 RBFOX2O43251 390 aaKnown RBP eCLIP15.2■□□□□ 0.026e-7■■■■□ 22.2
COL18A1-204ENST00000400337 WNT10AQ9GZT5 417 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 UQCR10Q9UDW1 63 aa15.2■□□□□ 0.02
COL18A1-204ENST00000400337 H0YIZ8 118 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 UPK2O00526 184 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 HBBP68871 147 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 RNASEH2CQ8TDP1 164 aaKnown RBP15.19■□□□□ 0.02
COL18A1-204ENST00000400337 A8MXK9 166 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 DDTP30046 118 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 LINC00518Q8N0U6 118 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 FOXA3P55318 350 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-204ENST00000400337 OR10AG1Q8NH19 301 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 PEX7O00628 323 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 UBE2L6O14933 153 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 C19orf54Q5BKX5 351 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 FAM159AQ6UWV7 190 aa15.19■□□□□ 0.02
COL18A1-204ENST00000400337 MIEN1Q9BRT3 115 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 CD55P08174 381 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 HERPUD1Q15011 391 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 POLEQ07864 2286 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 ZNF324BQ6AW86 544 aaPredicted RBP15.18■□□□□ 0.02
COL18A1-204ENST00000400337 RAB37Q96AX2 223 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 SMIM12Q96EX1 92 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 CD24P25063 80 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 CLEC19AQ6UXS0 136 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 TMEM133Q9H2Q1 129 aa15.18■□□□□ 0.02
COL18A1-204ENST00000400337 COTL1Q14019 142 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 ZNF56Q15929 161 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 C15orf61A6NNL5 157 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 SOD3P08294 240 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 CBLN4Q9NTU7 201 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 IGHV1-46P01743 117 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 C12orf54Q6X4T0 127 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 TMEM144Q7Z5S9 345 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 CACNA1GO43497 2377 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 THADAQ6YHU6 1953 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 TRBV20OR9-2A0A075B6H5 130 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 E9PLN8 166 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 TGFAP01135 160 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 VKORC1Q9BQB6 163 aa15.17■□□□□ 0.02
COL18A1-204ENST00000400337 IGKV1-27A0A075B6S5 117 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 NBR2O15453 112 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 HLA-DRB1P01911 266 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 SLC25A34Q6PIV7 304 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 ATOH7Q8N100 152 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 MPZP25189 248 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 LY6DQ14210 128 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 FAM209BQ5JX69 171 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 TMEM238LA0A1B0GVL6 79 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 A6NJY4 79 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 DMRTA2Q96SC8 542 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 ROS1P08922 2347 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 FAM131CQ96AQ9 280 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 IL36BQ9NZH7 164 aa15.16■□□□□ 0.02
COL18A1-204ENST00000400337 A0A0G2JLM5 398 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 H7C2G1 150 aa15.15■□□□□ 0.02
COL18A1-204ENST00000400337 DICER1Q9UPY3 1922 aaKnown RBP15.15■□□□□ 0.02
COL18A1-204ENST00000400337 DUTP33316 252 aaKnown RBP15.15■□□□□ 0.02
COL18A1-204ENST00000400337 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms