RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 A0A1B0GW64 132 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 VWC2LB2RUY7 222 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 SYNJ2BPP57105 145 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 UNC119Q13432 240 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 ACTL10Q5JWF8 245 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 DCAF12Q5T6F0 453 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 SMPXQ9UHP9 88 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 NYNRINQ9P2P1 1898 aaKnown RBP8.15□□□□□ -1.1
SMAD9-203ENST00000399275 IGHV5-51A0A0C4DH38 117 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 RPL8P62917 257 aaKnown RBP8.15□□□□□ -1.1
SMAD9-203ENST00000399275 PLXNB2O15031 1838 aa8.15□□□□□ -1.1
SMAD9-203ENST00000399275 IGHV2-70DA0A0C4DH43 119 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 NPIPB13A6NJU9 1138 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 NPIPB4C9JG80 1138 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 FAM90A26D6RGX4 464 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 ZNF721Q8TF20 911 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 SCNM1Q9BWG6 230 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 FBLN5Q9UBX5 448 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 KLRC4-KLRK1H3BQV0 150 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 MOSP00540 346 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 CCDC144NLQ6NUI1 221 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 CHD5Q8TDI0 1954 aa8.15□□□□□ -1.11
SMAD9-203ENST00000399275 LMO7DNF2Z398 122 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 KLF17Q5JT82 389 aaPredicted RBP8.14□□□□□ -1.11
SMAD9-203ENST00000399275 WDR31Q8NA23 367 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 FOXS1O43638 330 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 RBMY1FQ15415 496 aaKnown RBP8.14□□□□□ -1.11
SMAD9-203ENST00000399275 Q96M66 194 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 R4GN57 208 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 SCO2A0A1W2PP80 73 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 A0A1W2PPM0 123 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 NPIPB5A8MRT5 1133 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 FOXH1O75593 365 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 MST1P26927 711 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 TDRD15B5MCY1 1934 aaKnown RBP8.14□□□□□ -1.11
SMAD9-203ENST00000399275 TRAV8-3A0A0A6YYJ7 113 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 LYPD3O95274 346 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 C9orf40Q8IXQ3 194 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 JMJD8Q96S16 334 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 FZR1Q9UM11 496 aa8.14□□□□□ -1.11
SMAD9-203ENST00000399275 POLR2AP24928 1970 aaKnown RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 H0YIZ8 118 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 GPX1P07203 203 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 CNTFRP26992 372 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 RNF182Q8N6D2 247 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 TRAV24A0A0B4J272 114 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 SLC25A47Q6Q0C1 308 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 ARPC1AQ92747 370 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 C19orf24Q9BVV8 132 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 TM2D1Q9BX74 207 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 KNTC1P50748 2209 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 KIAA0100Q14667 2235 aaKnown RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 PDCD11Q14690 1871 aaKnown RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 PPBPP02775 128 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 IL6RP08887 468 aaPredicted RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 HTN1P15515 57 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 TNXAQ16473 311 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 GTSCR1Q86UQ5 136 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 OR9G1Q8NH87 305 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 RPP21Q9H633 154 aaKnown RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 K7N7A8 449 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 SMAD7O15105 426 aaKnown RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 SAP30O75446 220 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 MAGEA5P43359 124 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 MRPS11P82912 194 aaKnown RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 TDHQ8IZJ6 230 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 PHLDA1Q8WV24 401 aaPredicted RBP8.13□□□□□ -1.11
SMAD9-203ENST00000399275 HS3ST3B1Q9Y662 390 aa8.13□□□□□ -1.11
SMAD9-203ENST00000399275 IGHV2-5P01817 119 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 ATP5G3P48201 142 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 A0A1W2PRD5 423 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 A0A1W2PRF3 423 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 A0A1W2PRM7 423 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 UBE2L6O14933 153 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 RAC3P60763 192 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 IGLV3-21P80748 117 aaPredicted RBP8.12□□□□□ -1.11
SMAD9-203ENST00000399275 EGR4Q05215 589 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 FOXL1Q12952 345 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 TMEM178AQ8NBL3 297 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 KLF13Q9Y2Y9 288 aaPredicted RBP8.12□□□□□ -1.11
SMAD9-203ENST00000399275 PCM1Q15154 2024 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 A0A0U1RQV1 116 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 SLC25A20O43772 301 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 PGLYRP1O75594 196 aaPredicted RBP8.12□□□□□ -1.11
SMAD9-203ENST00000399275 CXCL12P48061 93 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 NPC2P61916 151 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 Q6AWC8 147 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 FAM214BQ7L5A3 538 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 KLF2Q9Y5W3 355 aaPredicted RBP8.12□□□□□ -1.11
SMAD9-203ENST00000399275 SYNGR3O43761 229 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 INAFM2P0DMQ5 153 aa8.12□□□□□ -1.11
SMAD9-203ENST00000399275 APOBEC3AP31941 199 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms