RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 A0A1W2PRX2 142 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 C7orf66A4D0T2 115 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 INS-IGF2F8WCM5 200 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 PRAF2O60831 178 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR13C7P0DN81 318 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 SLC25A6P12236 298 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 NDUFA11Q86Y39 141 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR2C3Q8N628 320 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR10C1Q96KK4 312 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 HSPB7Q9UBY9 170 aa9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TSSC4Q9Y5U2 329 aaPredicted RBP9.63□□□□□ -0.87
HLA-DQB1-203ENST00000399082 CMYA5Q8N3K9 4069 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 SNRPGP15A8MWD9 76 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 NDUFB8O95169 186 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TSPAN15O95858 294 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 IFNA17P01571 189 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TRGV3P03979 118 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 CDX1P47902 265 aaPredicted RBP9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TPPP2P59282 170 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 SPCS3P61009 180 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TNFRSF9Q07011 255 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TATDN3Q17R31 274 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 RGS21Q2M5E4 152 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 BSXQ3C1V8 233 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 NSUN5P1Q3KNT7 163 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 KHDC1LQ5JSQ8 128 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ETV3LQ6ZN32 361 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 HSD17B13Q7Z5P4 300 aaPredicted RBP9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR4D5Q8NGN0 318 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 P2RX4Q99571 388 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 SLA2Q9H6Q3 261 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 PLEKHA3Q9HB20 300 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ZFP57Q9NU63 452 aa9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 F11RQ9Y624 299 aaKnown RBP9.62□□□□□ -0.87
HLA-DQB1-203ENST00000399082 PIGBOS1A0A0B4J2F0 54 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 I3L521 148 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR2J3O76001 311 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 DHFRP00374 187 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 RHOGP84095 191 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ZBTB8BQ8NAP8 495 aaPredicted RBP9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ZNF114Q8NC26 417 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 KLHL30-AS1Q8NEE0 82 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR1S1Q8NH92 325 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TMEM170AQ8WVE7 144 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 UBE2E2Q96LR5 201 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 RBKSQ9H477 322 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ZNF355PQ9NSJ1 428 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ALG5Q9Y673 324 aa9.61□□□□□ -0.87
HLA-DQB1-203ENST00000399082 IGHV3-11P01762 117 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 HOXA1P49639 335 aaPredicted RBP9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 IL15RAQ13261 267 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 IAH1Q2TAA2 248 aaPredicted RBP9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 TMEM65Q6PI78 240 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 UXS1Q8NBZ7 420 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 C4orf3Q8WVX3 66 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR5B12Q96R08 314 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 PDCD10Q9BUL8 212 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 GPN1Q9HCN4 374 aaPredicted RBP9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 WNK1Q9H4A3 2382 aa9.6□□□□□ -0.87
HLA-DQB1-203ENST00000399082 MFSD2BA6NFX1 497 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 K7EIM0 57 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 IFNA21P01568 189 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 LGALS1P09382 135 aaKnown RBP9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 RUNX1Q01196 453 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 ID3Q02535 119 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 NECAP1Q8NC96 275 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 OR1P1Q8NH06 330 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 DTD1Q8TEA8 209 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 WDR89Q96FK6 387 aaPredicted RBP9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 RAX2Q96IS3 184 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 MAGT1Q9H0U3 335 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 FBXL7Q9UJT9 491 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 S4R3C0 116 aa9.59□□□□□ -0.87
HLA-DQB1-203ENST00000399082 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 CEBPZOSA8MTT3 80 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 SIX6O95475 246 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 TMEM50AO95807 157 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 TRBV12-3P01733 135 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 DEFA4P12838 97 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 POLR2GP62487 172 aaKnown RBP eCLIP9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 FHL3Q13643 280 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C15orf32Q32M92 178 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 ZNF343Q6P1L6 599 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 CCDC140Q96MF4 163 aa9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
HLA-DQB1-203ENST00000399082 PKD1L1Q8TDX9 2849 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 A0A0G2JLM5 398 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 C13orf42A0A1B0GVH6 325 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 NUDT19A8MXV4 375 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 F8W735 103 aaPredicted RBP9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 I3L2K1 104 aa9.57□□□□□ -0.88
HLA-DQB1-203ENST00000399082 M0QZ24 198 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms