RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF837Q96EG3 531 aaPredicted RBP11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 SMIM8Q96KF7 97 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 Q9UFV3 132 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 LINC00527Q9UJ94 153 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 SMIM6P0DI80 62 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 PSG7Q13046 419 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 Q5BKY6 102 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 C18orf15Q96N68 181 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 LY6G6EA0A0G2JKS1 128 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 ZNF660Q6AZW8 331 aaPredicted RBP11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 BIVMQ86UB2 503 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 TMEM160Q9NX00 188 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 U3KQA8 63 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 SCN2AQ99250 2005 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 H2BFSP57053 126 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 CACNG7P62955 275 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 CENPWQ5EE01 88 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 CSRP3P50461 194 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 TMEM170BQ5T4T1 132 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 IGFBP2P18065 325 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 TEX45Q8NA69 505 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 TMEM30BQ3MIR4 351 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 SVILO95425 2214 aa11.95□□□□□ -0.5
PCDHA11-201ENST00000398640 C17orf98A8MV24 154 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 SRD5A1P18405 259 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 FOXF2Q12947 444 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 WFDC12Q8WWY7 111 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 SAP30O75446 220 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 ASIPP42127 132 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 CYB5R2Q6BCY4 276 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 SLC25A28Q96A46 364 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 TOMM7Q9P0U1 55 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 TMEM14DPA8MWL7 114 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 TFF3Q07654 80 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 OR1P1Q8NH06 330 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 OR10AG1Q8NH19 301 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 NPIPB9F8W1W9 429 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 OR10S1Q8NGN2 331 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
PCDHA11-201ENST00000398640 CGAP01215 116 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 FABP2P12104 132 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 Q71RC1 249 aaPredicted RBP11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 AQP10Q96PS8 301 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 CKAP5Q14008 2032 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 IGKV3D-20A0A0C4DH25 116 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 C3orf56Q8N813 242 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 IFI27L2Q9H2X8 130 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 APC2O95996 2303 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 KBTBD11-OT1A0A1B0GTJ5 212 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 GAGE10A6NGK3 116 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 MSGN1A6NI15 193 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 TM4SF5O14894 197 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 FOXA3P55318 350 aaPredicted RBP11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 FAM166AQ6J272 317 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 LOC390937A0A1W2PQ73 354 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 SRSF7Q16629 238 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 WNT10AQ9GZT5 417 aa11.93□□□□□ -0.5
PCDHA11-201ENST00000398640 ASXL3Q9C0F0 2248 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 CD33P20138 364 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 GATA2P23769 480 aaPredicted RBP11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 CCDC88CQ9P219 2028 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 SOD3P08294 240 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 MST1P26927 711 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 PUSL1Q8N0Z8 303 aaKnown RBP11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 TMEM70Q9BUB7 260 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 HLA-DRB1P01911 266 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 POC1AQ8NBT0 407 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 FOXC2Q99958 501 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 MDC1Q14676 2089 aaKnown RBP11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 NBEAP1P0C6P0 100 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 FOLR2P14207 255 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 SAPCD1Q5SSQ6 148 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 NPCDR1Q9BY65 106 aa11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 MRPL13Q9BYD1 178 aaKnown RBP11.92□□□□□ -0.5
PCDHA11-201ENST00000398640 NPIPB7O75200 414 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 NMBP08949 121 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 ZNF415Q09FC8 603 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 ZNF385CQ66K41 422 aaPredicted RBP11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 C19orf24Q9BVV8 132 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 PIKFYVEQ9Y2I7 2098 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 FAM71F2Q6NXP2 309 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 TMEM219Q86XT9 240 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 TSC2P49815 1807 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 TDGF1P13385 188 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 KIAA1671Q9BY89 1806 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 TBX6O95947 436 aaPredicted RBP11.91□□□□□ -0.5
PCDHA11-201ENST00000398640 EFNA4P52798 201 aa11.9□□□□□ -0.5
PCDHA11-201ENST00000398640 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms