RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 ZNF488Q96MN9 340 aa12.47□□□□□ -0.41
CYLD-202ENST00000398568 ZNF407Q9C0G0 2248 aa12.47□□□□□ -0.41
CYLD-202ENST00000398568 TRAV24A0A0B4J272 114 aa12.47□□□□□ -0.41
CYLD-202ENST00000398568 RAB31Q13636 194 aa12.47□□□□□ -0.41
CYLD-202ENST00000398568 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
CYLD-202ENST00000398568 MGST2Q99735 147 aa12.47□□□□□ -0.41
CYLD-202ENST00000398568 OR2H1Q9GZK4 316 aa12.47□□□□□ -0.41
CYLD-202ENST00000398568 HEYLQ9NQ87 328 aaPredicted RBP12.47□□□□□ -0.41
CYLD-202ENST00000398568 TPRP12270 2363 aaKnown RBP12.47□□□□□ -0.41
CYLD-202ENST00000398568 SH2D7A6NKC9 451 aaPredicted RBP12.46□□□□□ -0.41
CYLD-202ENST00000398568 CDX4O14627 284 aaPredicted RBP12.46□□□□□ -0.41
CYLD-202ENST00000398568 NEURL1O76050 574 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 CA6P23280 308 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 PSG5Q15238 335 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 PSG3Q16557 428 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 SPATA31B1PQ5VZV4 182 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 SSX8Q7RTT4 187 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 NAA38Q9BRA0 125 aaKnown RBP12.46□□□□□ -0.41
CYLD-202ENST00000398568 AHCTF1Q8WYP5 2266 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 FOXH1O75593 365 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 NBL1P41271 181 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 ZBTB34Q8NCN2 500 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.41
CYLD-202ENST00000398568 CT55Q8WUE5 264 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 TMEM167BQ9NRX6 74 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 SPCS1Q9Y6A9 102 aa12.46□□□□□ -0.41
CYLD-202ENST00000398568 IGLV3-32A0A0A0MS00 114 aa12.46□□□□□ -0.42
CYLD-202ENST00000398568 A0A0G2JLM5 398 aa12.46□□□□□ -0.42
CYLD-202ENST00000398568 CRXO43186 299 aaPredicted RBP12.46□□□□□ -0.42
CYLD-202ENST00000398568 SNAI2O43623 268 aa12.46□□□□□ -0.42
CYLD-202ENST00000398568 EFNB3Q15768 340 aa12.46□□□□□ -0.42
CYLD-202ENST00000398568 CEACAM21Q3KPI0 293 aa12.46□□□□□ -0.42
CYLD-202ENST00000398568 SH2D2AQ9NP31 389 aa12.46□□□□□ -0.42
CYLD-202ENST00000398568 PPOXP50336 477 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 RAB9AP51151 201 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 HSD52Q0P140 79 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 WDR82Q6UXN9 313 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 OR1L3Q8NH93 324 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 SSBP4Q9BWG4 385 aaPredicted RBP12.45□□□□□ -0.42
CYLD-202ENST00000398568 NPFFR1Q9GZQ6 430 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 THYN1Q9P016 225 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
CYLD-202ENST00000398568 PPIAL4CA0A0B4J2A2 164 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 GDF1P27539 372 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 ZNF645Q8N7E2 425 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 OR4A5Q8NH83 315 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 A0A0G2JMM0 328 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 A0A1W2PPB8 328 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 KIR3DP1A8MWS1 328 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 CER1O95813 267 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 CKS1BP61024 79 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 PLA2G2CQ5R387 149 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.45□□□□□ -0.42
CYLD-202ENST00000398568 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 VSTM2AQ8TAG5 236 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 SAP25Q8TEE9 199 aa12.45□□□□□ -0.42
CYLD-202ENST00000398568 A0A1B0GX78 115 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 C10orf142B7Z368 130 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 ACTL6BO94805 426 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 GUSBP11Q6P575 273 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 TAAR6Q96RI8 345 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 PSG11Q9UQ72 335 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 C22orf46C9J442 243 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 J3QR89 54 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 ZNF207O43670 478 aaKnown RBP12.44□□□□□ -0.42
CYLD-202ENST00000398568 RAB37Q96AX2 223 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 FOXB1Q99853 325 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 KCNIP1Q9NZI2 227 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 KIAA1549Q9HCM3 1950 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 C17orf98A8MV24 154 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 P0C879 139 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 COX8AP10176 69 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 RPL30P62888 115 aaKnown RBP12.44□□□□□ -0.42
CYLD-202ENST00000398568 LINC00173Q6ZV60 143 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 ZNF48Q96MX3 618 aaPredicted RBP12.44□□□□□ -0.42
CYLD-202ENST00000398568 JMJD8Q96S16 334 aa12.44□□□□□ -0.42
CYLD-202ENST00000398568 SPAARA0A1B0GVQ0 90 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 NTF4P34130 210 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 CHCHD1Q96BP2 118 aaKnown RBP12.43□□□□□ -0.42
CYLD-202ENST00000398568 PERPQ96FX8 193 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 LILRA5A6NI73 299 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 LMO7DNF2Z398 122 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 P04436 131 aa12.43□□□□□ -0.42
CYLD-202ENST00000398568 OR2J3O76001 311 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 ZFAND5O76080 213 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 LIPFP07098 398 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 SPINK2P20155 84 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 FASLGP48023 281 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 STPG3Q8N7X2 389 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 NHLRC2Q8NBF2 726 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 HSPB8Q9UJY1 196 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 IGHV1-24A0A0C4DH33 117 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 OR5AL1P0C617 328 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 FABP2P12104 132 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 CFAP161Q6P656 301 aa12.42□□□□□ -0.42
CYLD-202ENST00000398568 AAED1Q7RTV5 226 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms