RNA–Protein interactions for RNA: ENST00000397337.6

NEB-202, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-202ENST00000397337 CX3CL1P78423 397 aa4.27□□□□□ -1.73
NEB-202ENST00000397337 SRPXP78539 464 aa4.27□□□□□ -1.73
NEB-202ENST00000397337 CYCSP99999 105 aaKnown RBP4.27□□□□□ -1.73
NEB-202ENST00000397337 TMEM177Q53S58 311 aa4.27□□□□□ -1.73
NEB-202ENST00000397337 LSM10Q969L4 123 aaKnown RBP4.27□□□□□ -1.73
NEB-202ENST00000397337 OR5B12Q96R08 314 aa4.27□□□□□ -1.73
NEB-202ENST00000397337 SLC25A32Q9H2D1 315 aa4.27□□□□□ -1.73
NEB-202ENST00000397337 FNDC4Q9H6D8 234 aaPredicted RBP4.27□□□□□ -1.73
NEB-202ENST00000397337 PARP11Q9NR21 331 aa4.27□□□□□ -1.73
NEB-202ENST00000397337 LYRM2Q9NU23 88 aaPredicted RBP4.27□□□□□ -1.73
NEB-202ENST00000397337 IGKV1OR2-108A0A075B7D4 117 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 KANTRA0A1W2PQU2 76 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 E5RGE8 158 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 HOXA3O43365 443 aaPredicted RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 MOSP00540 346 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 SLC38A11Q08AI6 406 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 PRSS8Q16651 343 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 PDPNQ86YL7 162 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 PUSL1Q8N0Z8 303 aaKnown RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 KCNRGQ8N5I3 272 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 Q8N9W7 124 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 CD300LFQ8TDQ1 290 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 SRSF12Q8WXF0 261 aaKnown RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 ST8SIA2Q92186 375 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 ACY3Q96HD9 319 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 RAB9BQ9NP90 201 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 HMSDA8MTL9 139 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 INAFM1C9JVW0 142 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 ITGB1BP1O14713 200 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 ATP6V0E1O15342 81 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 NBR2O15453 112 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 SLC25A4P12235 298 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 PAX1P15863 534 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 IL3RAP26951 378 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 VDAC2P45880 294 aaPredicted RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 ARHGDIBP52566 201 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 HSPE1P61604 102 aaKnown RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 SUMO1P63165 101 aaKnown RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 LOXL1Q08397 574 aaPredicted RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 FGL1Q08830 312 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 OR2F1Q13607 317 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 FXYD3Q14802 87 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 MSMO1Q15800 293 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 ASPHD1Q5U4P2 390 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 SSX7Q7RTT5 188 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 OSR1Q8TAX0 266 aaPredicted RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 IL22RA2Q969J5 263 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 SPIN2AQ99865 258 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 SPIN2BQ9BPZ2 258 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 SLC25A33Q9BSK2 321 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 UNKLQ9H9P5 680 aaKnown RBP4.26□□□□□ -1.73
NEB-202ENST00000397337 PLEKHA3Q9HB20 300 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 ZNF355PQ9NSJ1 428 aa4.26□□□□□ -1.73
NEB-202ENST00000397337 IGHV7-81A0A0B4J1V7 117 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 IGLC7A0M8Q6 106 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 PMS2P5A8MQ11 134 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 TEX22C9J3V5 150 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 RBFOX2O43251 390 aaKnown RBP eCLIP4.25□□□□□ -1.73
NEB-202ENST00000397337 BCL2L11O43521 198 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 CEACAM3P40198 252 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 FGF8P55075 233 aaPredicted RBP4.25□□□□□ -1.73
NEB-202ENST00000397337 C5orf64Q2M2E5 130 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 SLC25A24Q6NUK1 477 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 ETV3LQ6ZN32 361 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 SLC24A4Q8NFF2 622 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 AQP10Q96PS8 301 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 P2RX4Q99571 388 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 ARPC5LQ9BPX5 153 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 TMEM231Q9H6L2 316 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 ESM1Q9NQ30 184 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 DOK5Q9P104 306 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 AMMECR1Q9Y4X0 333 aaPredicted RBP4.25□□□□□ -1.73
NEB-202ENST00000397337 IGHV3OR16-13A0A075B7E8 117 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 IGHV3-74A0A0B4J1X5 117 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 MFSD2BA6NFX1 497 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 LY6G6DO95868 133 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 IGHV3-11P01762 117 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 RBP4P02753 201 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 CRYGBP07316 175 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 EGR2P11161 476 aaPredicted RBP4.25□□□□□ -1.73
NEB-202ENST00000397337 ATP6V0CP27449 155 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 SNCAP37840 140 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 OPRK1P41145 380 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 SRSF3P84103 164 aaKnown RBP4.25□□□□□ -1.73
NEB-202ENST00000397337 ZNF90Q03938 601 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 VMA21Q3ZAQ7 101 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 TMEM65Q6PI78 240 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 C1orf122Q6ZSJ8 110 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 SIGLECL1Q8N7X8 197 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 MALSU1Q96EH3 234 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 ADTRPQ96IZ2 230 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 KLK15Q9H2R5 256 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 NDUFA4L2Q9NRX3 87 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 BET1LQ9NYM9 111 aa4.25□□□□□ -1.73
NEB-202ENST00000397337 GPR137BO60478 399 aa4.24□□□□□ -1.73
NEB-202ENST00000397337 ATP6V1G1O75348 118 aa4.24□□□□□ -1.73
NEB-202ENST00000397337 OR2J3O76001 311 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms