RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ARPC4P59998 168 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 CATR1Q13166 79 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 TBCEQ15813 527 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-208ENST00000397204 ZNF773Q6PK81 442 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 TPRA1Q86W33 373 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 NR2C2APQ86WQ0 139 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 CADM3Q8N126 398 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 GDPD1Q8N9F7 314 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 BEST4Q8NFU0 473 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 OR10W1Q8NGF6 305 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 OR5B3Q8NH48 314 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 C11orf45Q8TAV5 145 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 SECTM1Q8WVN6 248 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 GPHA2Q96T91 129 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 RARRES2Q99969 163 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 CHRDL1Q9BU40 450 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 C21orf62Q9NYP8 219 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 SMPXQ9UHP9 88 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 BOLA2-SMG1P6H3BVE0 249 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 TNFSF12O43508 249 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 S1PR2O95136 353 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 PPYP01298 95 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 CD5P06127 495 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 CTSDP07339 412 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-208ENST00000397204 CTSGP08311 255 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 FGF9P31371 208 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-208ENST00000397204 AQP4P55087 323 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 WT1-ASQ06250 92 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 RBMS2Q15434 407 aaKnown RBP6.43□□□□□ -1.38
CAPN3-208ENST00000397204 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 C22orf42Q6IC83 251 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 HOGA1Q86XE5 327 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 DMBX1Q8NFW5 382 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 OR1L8Q8NGR8 309 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 OR13F1Q8NGS4 319 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 SCARB1Q8WTV0 552 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 BORCS5Q969J3 196 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 C20orf24Q9BUV8 137 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 SLC5A7Q9GZV3 580 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 C11orf68Q9H3H3 251 aaKnown RBP6.43□□□□□ -1.38
CAPN3-208ENST00000397204 NDUFA4L2Q9NRX3 87 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 TMEM140Q9NV12 185 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 RABL2AQ9UBK7 228 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-208ENST00000397204 BLOC1S6Q9UL45 172 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 ETV7Q9Y603 341 aa6.43□□□□□ -1.38
CAPN3-208ENST00000397204 F11RQ9Y624 299 aaKnown RBP6.43□□□□□ -1.38
CAPN3-208ENST00000397204 PCLOQ9Y6V0 5065 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 TRAV18A0A075B6X5 111 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 MRPS14O60783 128 aaKnown RBP6.42□□□□□ -1.38
CAPN3-208ENST00000397204 FCGR2BP31994 310 aaPredicted RBP6.42□□□□□ -1.38
CAPN3-208ENST00000397204 SCAND1P57086 179 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 NANOS2P60321 138 aaKnown RBP6.42□□□□□ -1.38
CAPN3-208ENST00000397204 ERVK-16P61578 105 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 APRG1Q8IVJ8 170 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 OR11H2Q8NH07 326 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 C2CD4CQ8TF44 421 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 DGCR14Q96DF8 476 aaKnown RBP6.42□□□□□ -1.38
CAPN3-208ENST00000397204 RHPN1-AS1Q9BWJ2 59 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 RHBDL2Q9NX52 303 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 COMMD9Q9P000 198 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 DAPK2Q9UIK4 370 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 DNAH2Q9P225 4427 aa6.42□□□□□ -1.38
CAPN3-208ENST00000397204 TRAV14DV4A0A0A6YYC5 116 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 A0A0A6YYH2 397 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 IGHV7-4-1A0A0J9YVY3 117 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 A6NJ64 397 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 FAM25EA8MYX2 175 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 K7EIM0 57 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 CHEK1O14757 476 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 ZNF207O43670 478 aaKnown RBP6.41□□□□□ -1.38
CAPN3-208ENST00000397204 SNAPC5O75971 98 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 PTHLHP12272 177 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 F2RP25116 425 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 CBX5P45973 191 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 MFAP2P55001 183 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 PAFAH1B2P68402 229 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 RELQ04864 619 aaPredicted RBP6.41□□□□□ -1.38
CAPN3-208ENST00000397204 Q56UQ5 140 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 AADACL3Q5VUY0 350 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 DHRS11Q6UWP2 260 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 ZNF818PQ6ZRF7 136 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 GVQW1Q8N7I0 195 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 UBAC2Q8NBM4 344 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 TMEM116Q8NCL8 245 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 OR5AP2Q8NGF4 316 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 NRG4Q8WWG1 115 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 LSM10Q969L4 123 aaKnown RBP6.41□□□□□ -1.38
CAPN3-208ENST00000397204 OR10C1Q96KK4 312 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 TMEM56Q96MV1 263 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 CMTM3Q96MX0 182 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 RNF2Q99496 336 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 TXN2Q99757 166 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 HINT2Q9BX68 163 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 DIABLOQ9NR28 239 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 TXNL4BQ9NX01 149 aaKnown RBP6.41□□□□□ -1.38
CAPN3-208ENST00000397204 FKBP11Q9NYL4 201 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 FBXL17Q9UF56 701 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 RRP15Q9Y3B9 282 aaKnown RBP6.41□□□□□ -1.38
CAPN3-208ENST00000397204 DNAH17Q9UFH2 4485 aa6.41□□□□□ -1.38
CAPN3-208ENST00000397204 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms