RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 TRAV14DV4A0A0A6YYC5 116 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 TEX50A0A1B0GTY4 177 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 NUPL2O15504 423 aaKnown RBP10.81□□□□□ -0.68
SEC13-206ENST00000397102 YIF1AO95070 293 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 GIG44P09565 113 aaPredicted RBP10.81□□□□□ -0.68
SEC13-206ENST00000397102 OR10A3P58181 314 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 ZNF773Q6PK81 442 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 TCF24Q7RTU0 167 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 DMBX1Q8NFW5 382 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 OR1L8Q8NGR8 309 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 NUDCD2Q8WVJ2 157 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 LSM10Q969L4 123 aaKnown RBP10.81□□□□□ -0.68
SEC13-206ENST00000397102 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 ACOT13Q9NPJ3 140 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 X6R8D5 127 aa10.81□□□□□ -0.68
SEC13-206ENST00000397102 IGHV3OR16-13A0A075B7E8 117 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 IGHV3-74A0A0B4J1X5 117 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 TRAV2A0A0B4J234 112 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 SULT1C2O00338 296 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 MLLT11Q13015 90 aaPredicted RBP10.8□□□□□ -0.68
SEC13-206ENST00000397102 MORN3Q6PF18 240 aaPredicted RBP10.8□□□□□ -0.68
SEC13-206ENST00000397102 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 PLEKHA2Q9HB19 425 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 NDUFA4L2Q9NRX3 87 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 SCN3BQ9NY72 215 aa10.8□□□□□ -0.68
SEC13-206ENST00000397102 TRAV1-2A0A0B4J238 106 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 DNASE2O00115 360 aaPredicted RBP10.79□□□□□ -0.68
SEC13-206ENST00000397102 EIF4EP06730 217 aaKnown RBP10.79□□□□□ -0.68
SEC13-206ENST00000397102 SPP1P10451 314 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 C12orf74Q32Q52 190 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 Q6ZR54 194 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
SEC13-206ENST00000397102 OR13F1Q8NGS4 319 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 GIMAP1Q8WWP7 306 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 HINT2Q9BX68 163 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 VSIRQ9H7M9 311 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 COMMD9Q9P000 198 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 CELA1Q9UNI1 258 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 AGRNO00468 2067 aa10.79□□□□□ -0.68
SEC13-206ENST00000397102 TMEM235A6NFC5 223 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 ST8SIA3O43173 380 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 FCGR2CP31995 323 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 GNG2P59768 71 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 SOHLH1Q5JUK2 328 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 FAM24BQ8N5W8 94 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 DUSP18Q8NEJ0 188 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 ST8SIA2Q92186 375 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 TXN2Q99757 166 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 GINS3Q9BRX5 216 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 CCDC90BQ9GZT6 254 aa10.78□□□□□ -0.68
SEC13-206ENST00000397102 NXF2Q9GZY0 626 aaKnown RBP10.78□□□□□ -0.68
SEC13-206ENST00000397102 SSX5O60225 188 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 PPYP01298 95 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 RAB3BP20337 219 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 C4BPBP20851 252 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 MYL9P24844 172 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 MFAP4P55083 255 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 ARPC4P59998 168 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 ERVK-16P61578 105 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 ZNF767PQ75MW2 155 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 OR51H1Q8NH63 302 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 SLC5A7Q9GZV3 580 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 TBC1D24Q9ULP9 559 aa10.77□□□□□ -0.69
SEC13-206ENST00000397102 IGLV2-18A0A075B6J9 118 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 MARCH11A6NNE9 402 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 CASQ2O14958 399 aaPredicted RBP10.76□□□□□ -0.69
SEC13-206ENST00000397102 IFNA10P01566 189 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 CD74P04233 296 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 Q6ZRM9 215 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 LILRB2Q8N423 598 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 MAPKAPK5-AS1Q8N8E1 139 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 OR1P1Q8NH06 330 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 SLC25A46Q96AG3 418 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 TMEM56Q96MV1 263 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 MGLLQ99685 303 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 TMEM14BQ9NUH8 114 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 OR51B2Q9Y5P1 312 aa10.76□□□□□ -0.69
SEC13-206ENST00000397102 I3L2K1 104 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 SCGNO76038 276 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 IFNA21P01568 189 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 IFNA17P01571 189 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 APOHP02749 345 aaPredicted RBP10.75□□□□□ -0.69
SEC13-206ENST00000397102 RPL11P62913 178 aaKnown RBP10.75□□□□□ -0.69
SEC13-206ENST00000397102 RCN1Q15293 331 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 AADACL3Q5VUY0 350 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 ZNF818PQ6ZRF7 136 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 UBE2DNLQ8IWF7 75 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 CADM3Q8N126 398 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 CSNK1G2-AS1Q8NCQ2 148 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 BEST4Q8NFU0 473 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 RABAC1Q9UI14 185 aa10.75□□□□□ -0.69
SEC13-206ENST00000397102 RGS10O43665 173 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 GNG7O60262 68 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 PTHLHP12272 177 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 NPY1RP25929 384 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 FXYD4P59646 89 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 UBE2UQ5VVX9 321 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms