RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ATP6V0CP27449 155 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 AANATQ16613 207 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 TUSC1Q2TAM9 212 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 PCNPQ8WW12 178 aaKnown RBP10.09□□□□□ -0.79
TRIM39-204ENST00000396548 P2RX4Q99571 388 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 HINT2Q9BX68 163 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 EGR2P11161 476 aaPredicted RBP10.08□□□□□ -0.8
TRIM39-204ENST00000396548 SULT1A2P50226 295 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 ETV3LQ6ZN32 361 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 SRSF12Q8WXF0 261 aaKnown RBP10.08□□□□□ -0.8
TRIM39-204ENST00000396548 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 DMRT1Q9Y5R6 373 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 AREGP15514 252 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 MFAP2P55001 183 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 DLK1P80370 383 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
TRIM39-204ENST00000396548 ZNF562Q6V9R5 426 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 RBM14Q96PK6 669 aaKnown RBP10.08□□□□□ -0.8
TRIM39-204ENST00000396548 KIAA1456Q9P272 454 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 MXRA5Q9NR99 2828 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 FNDC10F2Z333 226 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 RAB11AP62491 216 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 NDPQ00604 133 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 ASPHD1Q5U4P2 390 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 HSD17B11Q8NBQ5 300 aa10.08□□□□□ -0.8
TRIM39-204ENST00000396548 PLXNB1O43157 2135 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 AMY1AP04745 511 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 RUNX1Q01196 453 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 A6NDX4 124 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 ERHP84090 104 aaKnown RBP10.07□□□□□ -0.8
TRIM39-204ENST00000396548 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
TRIM39-204ENST00000396548 C5orf56Q8N8D9 126 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 TAF15Q92804 592 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRIM39-204ENST00000396548 UQCC1Q9NVA1 299 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 WDR83OSQ9Y284 106 aa10.07□□□□□ -0.8
TRIM39-204ENST00000396548 LSM4Q9Y4Z0 139 aaKnown RBP10.07□□□□□ -0.8
TRIM39-204ENST00000396548 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 GNB1P62873 340 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 CX3CL1P78423 397 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 TREML4Q6UXN2 200 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 GNPNAT1Q96EK6 184 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-204ENST00000396548 CXorf58Q96LI9 332 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 SSX3Q99909 188 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 FBXO7Q9Y3I1 522 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 EIF5AL1Q6IS14 154 aaKnown RBP10.06□□□□□ -0.8
TRIM39-204ENST00000396548 HSD17B13Q7Z5P4 300 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-204ENST00000396548 RNF141Q8WVD5 230 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 PSMG3Q9BT73 122 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-204ENST00000396548 PRDM13Q9H4Q3 707 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 MED9Q9NWA0 146 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 TIMM9Q9Y5J7 89 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 UBE2L5PA0A1B0GUS4 154 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 NCBP2LA6PVI3 153 aaKnown RBP10.06□□□□□ -0.8
TRIM39-204ENST00000396548 REG1AP05451 166 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 FBP1P09467 338 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 FXYD3Q14802 87 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 PLGLAQ15195 96 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 LYPD6BQ8NI32 183 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 HSPB9Q9BQS6 159 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 C1RLQ9NZP8 487 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 PRELID1Q9Y255 219 aa10.06□□□□□ -0.8
TRIM39-204ENST00000396548 OTOGQ6ZRI0 2925 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 IFNA5P01569 189 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 CRYGCP07315 174 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 CTRB1P17538 263 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 KLK9Q2XQG4 91 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 CTRB2Q6GPI1 263 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 OR2G3Q8NGZ4 309 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 LRRC20Q8TCA0 184 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 RNASEH2CQ8TDP1 164 aaKnown RBP10.05□□□□□ -0.8
TRIM39-204ENST00000396548 SSMEM1Q8WWF3 244 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 RSG1Q9BU20 258 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 KLK9Q9UKQ9 250 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 NAV3Q8IVL0 2385 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 MDFIC2A0A1B0GVS7 189 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 MLANAQ16655 118 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 OR1P1Q8NH06 330 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
TRIM39-204ENST00000396548 F11RQ9Y624 299 aaKnown RBP10.05□□□□□ -0.8
TRIM39-204ENST00000396548 HECTD1Q9ULT8 2610 aa10.05□□□□□ -0.8
TRIM39-204ENST00000396548 ACTL6BO94805 426 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 IFNA4P05014 189 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 GPX4P36969 197 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-204ENST00000396548 CD69Q07108 199 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 DEFB112Q30KQ8 113 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 IQCF2Q8IXL9 164 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 SAT2Q96F10 170 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-204ENST00000396548 NPCDR1Q9BY65 106 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 SNCAP37840 140 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 GAMTQ14353 236 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 ARPC1AQ92747 370 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 SLC25A33Q9BSK2 321 aa10.04□□□□□ -0.8
TRIM39-204ENST00000396548 FAM96BQ9Y3D0 163 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms