RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 EDA2RQ9HAV5 297 aa6.9□□□□□ -1.3
SOX6-202ENST00000396356 MRPS18BQ9Y676 258 aaKnown RBP6.9□□□□□ -1.3
SOX6-202ENST00000396356 COL11A2P13942 1736 aaPredicted RBP6.9□□□□□ -1.3
SOX6-202ENST00000396356 MGAMO43451 1857 aa6.9□□□□□ -1.3
SOX6-202ENST00000396356 SPXQ9BT56 116 aa6.9□□□□□ -1.3
SOX6-202ENST00000396356 HS3ST3B1Q9Y662 390 aa6.9□□□□□ -1.3
SOX6-202ENST00000396356 TRAV21A0A0B4J279 112 aa6.9□□□□□ -1.3
SOX6-202ENST00000396356 KLF4O43474 513 aa6.9□□□□□ -1.3
SOX6-202ENST00000396356 FAM208BQ5VWN6 2430 aa6.9□□□□□ -1.3
SOX6-202ENST00000396356 TRBV6-7A0A0A0MS04 114 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 RPS27P42677 84 aaKnown RBP6.9□□□□□ -1.31
SOX6-202ENST00000396356 MINOS1Q5TGZ0 78 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 MINOS1-NBL1R4GNA1 71 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 MMP23AO75900 390 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 GLCCI1Q86VQ1 547 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 CXorf67Q86X51 503 aaPredicted RBP6.9□□□□□ -1.31
SOX6-202ENST00000396356 F8VVB4 439 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 F8VWA3 439 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 FOXS1O43638 330 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 GATA3P23771 443 aa6.9□□□□□ -1.31
SOX6-202ENST00000396356 RGP1Q92546 391 aaPredicted RBP6.9□□□□□ -1.31
SOX6-202ENST00000396356 C15orf61A6NNL5 157 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 CCL21O00585 134 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 ADRA2AP08913 450 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 SSTR5P35346 364 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 FHL5Q5TD97 284 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 SCGB3A1Q96QR1 104 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 PGPA6NDG6 321 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 FAM90A27PA6NNH2 459 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 SPINT1O43278 529 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 IGKV3-11P04433 115 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 CCL3P10147 92 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 COL9A1P20849 921 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 PGFP49763 221 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 ZNF880Q6PDB4 577 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 ACP7Q6ZNF0 438 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 OR5AN1Q8NGI8 311 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 ANAPC1Q9H1A4 1944 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 CT62P0C5K7 136 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 VSIG10L2P0DP72 767 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 CFHR1Q03591 330 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 SPINK14Q6IE38 97 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 SPRED2Q7Z698 418 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 SMIM10L1P0DMW3 83 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 CXCL2P19875 107 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 FCGR2BP31994 310 aaPredicted RBP6.89□□□□□ -1.31
SOX6-202ENST00000396356 C3orf36Q3SXR2 165 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 MRPL14Q6P1L8 145 aaKnown RBP6.89□□□□□ -1.31
SOX6-202ENST00000396356 ZNF841Q6ZN19 808 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 KLF14Q8TD94 323 aaPredicted RBP6.89□□□□□ -1.31
SOX6-202ENST00000396356 SMIM10Q96HG1 83 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 UBE2CO00762 179 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 NANOS3P60323 173 aaKnown RBP6.89□□□□□ -1.31
SOX6-202ENST00000396356 TSKUQ8WUA8 353 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 USMG5Q96IX5 58 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 IL17BQ9UHF5 180 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 IGHV1-69-2A0A0G2JMI3 117 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 FER1L6-AS1Q8NA97 138 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 SMOC1Q9H4F8 434 aa6.89□□□□□ -1.31
SOX6-202ENST00000396356 MYO9AB2RTY4 2548 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 A0A1W2PP11 408 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 A8MWV9 139 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 PDCD1Q15116 288 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 SRSF12Q8WXF0 261 aaKnown RBP6.88□□□□□ -1.31
SOX6-202ENST00000396356 ISOC2Q96AB3 205 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 CSRP3P50461 194 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 KLRB1Q12918 225 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 NEU1Q99519 415 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 REPIN1Q9BWE0 567 aaKnown RBP6.88□□□□□ -1.31
SOX6-202ENST00000396356 TMEM106BQ9NUM4 274 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 FOXJ2Q9P0K8 574 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 A0A1B0GV90 55 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 Q6ZS52 159 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 A0A1B0GWB2 263 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 PF4V1P10720 104 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 LINC00305Q7Z4B0 112 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 NRN1Q9NPD7 142 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 NHP2Q9NX24 153 aaKnown RBP6.88□□□□□ -1.31
SOX6-202ENST00000396356 IGHV3-43A0A0B4J1X8 118 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 RRHO14718 337 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 IGHV3-43DP0DP04 118 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 MIC13Q5XKP0 118 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 ZFAND6Q6FIF0 208 aa6.88□□□□□ -1.31
SOX6-202ENST00000396356 TCRBV4S1A1TA0A5B7 111 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 RHODO00212 210 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 NBR2O15453 112 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 SPINK4O60575 86 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 ZNF708P17019 499 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 BCL6BQ8N143 479 aaPredicted RBP6.87□□□□□ -1.31
SOX6-202ENST00000396356 ABHD12Q8N2K0 398 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 SIGMAR1Q99720 223 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 TLNRD1Q9H1K6 362 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 NDUFS8O00217 210 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 SLC25A15Q9Y619 301 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 IGLV3-12A0A075B6K2 115 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 DUX5Q96PT3 197 aa6.87□□□□□ -1.31
SOX6-202ENST00000396356 M0R2P5 195 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms