RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 OPN1MW2P0DN77 364 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 OPN1MW3P0DN78 364 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 C5orf64Q2M2E5 130 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 TMEM182Q6ZP80 229 aaPredicted RBP9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 Q6ZRG5 221 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 CITED4Q96RK1 184 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 KIAA1456Q9P272 454 aa9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 ASH1LQ9NR48 2969 aaKnown RBP9.49□□□□□ -0.89
GTF2A2-202ENST00000396060 UBE2L5PA0A1B0GUS4 154 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 TEX22C9J3V5 150 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 TSPAN9O75954 239 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 MBP02144 154 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 CAMLGP49069 296 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 BPIFB3P59826 476 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 MMDQ15546 238 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 C10orf55Q5SWW7 151 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 AKR1C8PQ5T2L2 129 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 NPCDR1Q9BY65 106 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 C7orf69Q9H7B7 122 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 HIF1ANQ9NWT6 349 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 C1RLQ9NZP8 487 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 RFNGQ9Y644 331 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 CREBBPQ92793 2442 aa9.48□□□□□ -0.89
GTF2A2-202ENST00000396060 NAV3Q8IVL0 2385 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 BTBD17A6NE02 478 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 C17orf112F2Z3M2 114 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 TEX46H3BTG2 121 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 FCN1O00602 326 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 PRH1P02810 166 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 OR13C7P0DN81 318 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 FGF7P21781 194 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 CD69Q07108 199 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 TNXAQ16473 311 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 ZNF562Q6V9R5 426 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 MBD3L1Q8WWY6 194 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 P2RX4Q99571 388 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 RSG1Q9BU20 258 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 FBXO7Q9Y3I1 522 aa9.47□□□□□ -0.89
GTF2A2-202ENST00000396060 CRYGCP07315 174 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 OPRK1P41145 380 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 FHITP49789 147 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 HNF4GQ14541 408 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 TMEM41BQ5BJD5 291 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 Q5PR19 223 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 TMEM144Q7Z5S9 345 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 ZNF709Q8N972 641 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 LFNGQ8NES3 379 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 OR1P1Q8NH06 330 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 SRSF12Q8WXF0 261 aaKnown RBP9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 FAM210AQ96ND0 272 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 RPRMQ9NS64 109 aa9.46□□□□□ -0.89
GTF2A2-202ENST00000396060 TMEM11P17152 192 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 PMS2P11Q13670 270 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 HES1Q14469 280 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 TEPPQ6URK8 271 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 OR1L6Q8NGR2 347 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 FAM213BQ8TBF2 198 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 HRH4Q9H3N8 390 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 KCNIP2Q9NS61 270 aa9.46□□□□□ -0.9
GTF2A2-202ENST00000396060 PRRC2AP48634 2157 aaKnown RBP9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 CSPG4Q6UVK1 2322 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 KRBOX1C9JBD0 128 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 CORTO00230 105 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 TSPAN15O95858 294 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 HLA-DRB1P01911 266 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 HBE1P02100 147 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 CD24P25063 80 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 RPL29P47914 159 aaKnown RBP9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 RAB31Q13636 194 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 GAMTQ14353 236 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 PLGLAQ15195 96 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 FBLN7Q53RD9 439 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 FAM120AOSQ5T036 256 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 Q8N9W7 124 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 PIFOQ8TCI5 191 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 SCRT1Q9BWW7 348 aa9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 F11RQ9Y624 299 aaKnown RBP9.45□□□□□ -0.9
GTF2A2-202ENST00000396060 MAP1AP78559 2803 aaPredicted RBP9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 TRAV40A0A0B4J280 105 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 CD5P06127 495 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 IGHV4-38-2P0DP08 117 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 PAX6P26367 422 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 CX3CL1P78423 397 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 FXYD3Q14802 87 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 TMEM249Q2WGJ8 235 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 KLK9Q2XQG4 91 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 ACSM6Q6P461 480 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 MGST2Q99735 147 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 GGTLC1Q9BX51 225 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 KLK9Q9UKQ9 250 aa9.44□□□□□ -0.9
GTF2A2-202ENST00000396060 ABCA1O95477 2261 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms